Query= MSMg01no455_k16.b1 MSMg01no455_k16.b1 CHROMAT_FILE:
MSMg01no455_k16.b1 PHD_FILE: MSMg01no455_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:14 2005
(534 letters)
>mm_chr13_41195681_41196614
Length = 934
Score = 864 bits (447), Expect = 0.0
Identities = 498/515 (96%)
Strand = Plus / Minus
Query: 20 ctcaagaaggtaaatacatccaacaaaggtaaatatgcccaaagatatacccgaaaggtg 79
|||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 734 ctcaagaaggtaaatacatctaacaaaggtaaatatgcccaaagatatgctcgaaaggtg 675
Query: 80 aataatccagcaaagtacagacacaaacagtttgaactcccacagttaccaatgactttt 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aataatccagcaaagtacagacacaaacagtttgaactcccacagttaccaatgactttt 615
Query: 140 tgaatgtttcccaggggaaattctaaattaagtattgaacccgttctaattaatttatct 199
||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||
Sbjct: 614 tgaatgtttcccaggggaaattctaaattaagtatggaacctgttctaattaatgtatct 555
Query: 200 ggtcactgattcaaagggcaaactctccagttttgattgaacatctgccaaggtgggcta 259
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 554 ggtcactgattcaaagggcaaactctccagttttgattgaacatctgccgaggtgggcta 495
Query: 260 tcccacttgtgaagggcaactcaatagtcaatcaagatacccaagaccaaacaccttgag 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcccacttgtgaagggcaactcaatagtcaatcaagatacccaagaccaaacaccttgag 435
Query: 320 tgatatacttcctggcatgtggttgtgccctgagcaattttagcatcgggcccatcagag 379
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 434 tgatatacttcctggcatgcggttgtgccctgagcaattttagcattgggcccatcagag 375
Query: 380 cctatctcctctacctcttagtgaaactgtggaatcctggacagttcaggccagaaagca 439
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cctatctcctctaccccttagtgaaactgtggaatcctggacagttcaggccagaaagca 315
Query: 440 cagcatttagcaaggctccacagtggtaggtgttcccgagagacacatgtatggatgcac 499
||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||||||
Sbjct: 314 cagcatttagccaggctccacaatggtaggtgttccctagagacatgtgtatggatgcac 255
Query: 500 acttgcgtatctgcacacactcacacacaccaggt 534
||| | |||||||||||||||||||||||||||||
Sbjct: 254 actcgagtatctgcacacactcacacacaccaggt 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_k16.g1 MSMg01no455_k16.g1 CHROMAT_FILE:
MSMg01no455_k16.g1 PHD_FILE: MSMg01no455_k16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:14 2005
(234 letters)
>mm_chr13_41021245_41021878
Length = 634
Score = 371 bits (192), Expect = e-107
Identities = 218/234 (93%), Gaps = 12/234 (5%)
Strand = Plus / Plus
Query: 1 aaggccaacttggggttcagagggagatcttgtctacaaaaatggattaaggtatatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaacttggggttcagagggagatcttgtctacaaaaatggattaaggtatatgtg 260
Query: 61 aatatttaattatgtacaaactcggctatcattggcaaacatctgcaggacgaaatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatttaattatgtacaaactcggctatcattggcaaacatctgcaggacgaaatttaa 320
Query: 121 catgagttccaccccagtaggataggctgatacagttgctaccttagaactggcaacatg 180
||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 catgaattccaccccagtaggataggct------------accttagaactggcaacatg 368
Query: 181 ccggggcaccagcacttgggaggtagaggcaggtggatttctgagttcaaggcc 234
| ||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 369 ctggggcaccagcacttgggaggcagaggcaggtggatttctgagttcgaggcc 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
