Query= MSMg01no456_e09.b1 MSMg01no456_e09.b1 CHROMAT_FILE:
MSMg01no456_e09.b1 PHD_FILE: MSMg01no456_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:02 2005
(386 letters)
>mm_chr13_87039970_87040759
Length = 790
Score = 669 bits (346), Expect = 0.0
Identities = 376/392 (95%), Gaps = 12/392 (3%)
Strand = Plus / Minus
Query: 1 gtttttcaggatttcttaatgttattataggctgtagatttctcttcctttacagccaca 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gtttttcagtatttcttaatgttattataggctgtagatttctcttcctttacagccaca 529
Query: 61 tattattttacaacacccaacctttttttcgtggacatataagacaatgttgcacagcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 528 tattattttacaacacccaacctttttttcgtggacatataagacaatgttgcacaacct 469
Query: 121 agtg----ttttttttttttaataatgaagactactatgaatatagtacaatttaaagag 176
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agtgttttttttttttttttaataatgaagactactatgaatatagtacaatttaaagag 409
Query: 177 ttttgaattttggtttaagttactttatatgaggaactagtgcagaaaatgtcacaattg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttttgaattttggtttaagttactttatatgaggaactagtgcagaaaatgtcacaattg 349
Query: 237 tattttttttattctaggtgtttcatatggttttccacaaaacatgcagtatttgtactc 296
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tatttttcatattctaggtgtttcatatggttttccacaaaacatgcagtatttgtactc 289
Query: 297 ctaccagttgtccaagagtaataaaacttgcaatttaaagttttatcca----ccccttt 352
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 288 ctaccagttgtccaagagtaataaaacttgcaatttaaagttttatccatttt----ttt 233
Query: 353 ccctttgtccactaagttaacttggataattg 384
||||||||||||||||||||||||||||||||
Sbjct: 232 ccctttgtccactaagttaacttggataattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 790
Length adjustment: 9
Effective length of query: 377
Effective length of database: 781
Effective search space: 294437
Effective search space used: 294437
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_e09.g1 MSMg01no456_e09.g1 CHROMAT_FILE:
MSMg01no456_e09.g1 PHD_FILE: MSMg01no456_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:02 2005
(135 letters)
>mm_chr13_86849189_86849723
Length = 535
Score = 252 bits (130), Expect = 9e-72
Identities = 133/134 (99%)
Strand = Plus / Plus
Query: 1 tctatttattaaatatattcttttttcttgaacatgaataattgttattattgctacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatttattaaatatattcttttttcttgaacatgaataattgttattattgctacttt 260
Query: 61 atatttttttctattacttacagcttactactggctgtaagatattgggtatatttaaga 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 atatttttttctattacttacagcttactactggctgtaagatattgagtatatttaaga 320
Query: 121 atgtatatattgtg 134
||||||||||||||
Sbjct: 321 atgtatatattgtg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
