Query= MSMg01no456_g13.b1 MSMg01no456_g13.b1 CHROMAT_FILE:
MSMg01no456_g13.b1 PHD_FILE: MSMg01no456_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:13 2005
(281 letters)
>mm_chr13_47678965_47679646
Length = 682
Score = 509 bits (263), Expect = e-148
Identities = 278/285 (97%), Gaps = 7/285 (2%)
Strand = Plus / Minus
Query: 1 cattggcaagtaatctgcctttttttaaaaaaatcatacaaatggaaatacaagaacatc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 482 cattggcaagtaatctgccttttttt-aaaaaatcatacaaatggaaatacaagaacatc 424
Query: 61 ctacatctatggctctcaggtgccataggaaataggaaaatgtccatttgggttcttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctacatctatggctctcaggtgccataggaaataggaaaatgtccatttgggttcttttc 364
Query: 121 aagtcatttcttttctttaatagtaatgcatttctttgggtatttattgtttggtg-aca 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 363 aagtcatttcttttctttaatagtaatgcatttctttgggtatttattgtttggtgtaca 304
Query: 180 tattcagg---tttatagcttctcctgccttctttatttttattattatttagaaacctg 236
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tattcaggtgttttat--cttctcctgccttctttatttttattattatttagaaacctg 246
Query: 237 caaagagaaacatcacacgtattttctttaattttatccagtttg 281
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 caaagagaaacatcacacgtattttctttaattttatccagtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 682
Length adjustment: 9
Effective length of query: 272
Effective length of database: 673
Effective search space: 183056
Effective search space used: 183056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_g13.g1 MSMg01no456_g13.g1 CHROMAT_FILE:
MSMg01no456_g13.g1 PHD_FILE: MSMg01no456_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:13 2005
(138 letters)
>mm_chr13_47483082_47483619
Length = 538
Score = 209 bits (108), Expect = 6e-59
Identities = 120/124 (96%)
Strand = Plus / Plus
Query: 1 aggatagagatgcttagagactaggggatgactagggaaaatggctactgcctgggcaca 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aggatagagatgcttagagactaggggatggctagggaaaatggctactgcctgggcacg 260
Query: 61 tggttgtgaggctgggtagaactcagtaggggtggtgataaggagcctagagagaagaat 120
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 261 tggttgtgaggctgggtagaactcagtaggggtagtgataaggagccaagagagaagaat 320
Query: 121 ttgt 124
||||
Sbjct: 321 ttgt 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 538
Length adjustment: 8
Effective length of query: 130
Effective length of database: 530
Effective search space: 68900
Effective search space used: 68900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
