Query= MSMg01no456_h04.b1 MSMg01no456_h04.b1 CHROMAT_FILE:
MSMg01no456_h04.b1 PHD_FILE: MSMg01no456_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:16 2005
(553 letters)
>mm_chr13_71238633_71239585
Length = 953
Score = 1040 bits (538), Expect = 0.0
Identities = 549/553 (99%)
Strand = Plus / Plus
Query: 1 gagagttaccaagttaccacgtaggcttacatgtaggacaatcgcggtgggcaatgagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagagttaccaagttaccacgtaggcttacatgtaggacaatcgcggtgggcaatgagtg 260
Query: 61 tctcgattagactactcacacctctaagtgagacgttgcctctaggagttaaatcccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcgattagactactcacacctctaagtgagacgttgcctctaggagttaaatcccaca 320
Query: 121 gcttcctgagttcctgaggacaaggacaacatccttctgaataaagtagacggattaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcctgagttcctgaggacaaggacaacatccttctgaataaagtagacggattaagt 380
Query: 181 tgaggctgtgcaaacaacatgcaaaatgcactgctgcatcaagttaattccaaataaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggctgtgcaaacaacatgcaaaatgcactgctgcatcaagttaattccaaataaatt 440
Query: 241 aaaatgttcattatacttggaagctgcaagacatgctatcctaccggagtctcgggcatg 300
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatgttcacaacacttggaagctgcaagacatgctatcctaccggagtctcgggcatg 500
Query: 301 tgccaggcaggggccgttcctgggcacagtcaattcgtttgtttttcttttgatgccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccaggcaggggccgttcctgggcacagtcaattcgtttgtttttcttttgatgccaac 560
Query: 361 acataagcaaagccttaaagacatatttagcaattaaaaaatgtggtccatttcttagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acataagcaaagccttaaagacatatttagcaattaaaaaatgtggtccatttcttagtc 620
Query: 421 agagaggaaggcctcttctgagaccctggatttgaaggtctcctcacccagttttccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagaggaaggcctcttctgagaccctggatttgaaggtctcctcacccagttttccttc 680
Query: 481 ccagtcaatgacttcctttaatcaagttctgtatttccacttaanaggccaatatgtgct 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ccagtcaatgacttcctttaatcaagttctgtatttccacttaaaaggccaatatgtgct 740
Query: 541 aataaaaataaaa 553
|||||||||||||
Sbjct: 741 aataaaaataaaa 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_h04.g1 MSMg01no456_h04.g1 CHROMAT_FILE:
MSMg01no456_h04.g1 PHD_FILE: MSMg01no456_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:16 2005
(241 letters)
>mm_chr13_71370435_71371075
Length = 641
Score = 418 bits (216), Expect = e-121
Identities = 232/240 (96%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 1 tgtggaccggcgtcatgtctgagatcctcaggctgccgttgtgcctcctcagaccacaga 60
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 450 tgtggaccgg-----tgtctgagatcctcaggctgccattgtgcctcctcagaccacaga 396
Query: 61 cagaacactcagagcattttcctgtccagtcaaggcttaagaaaaatcacagtttgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cagaacactcagagcattttcctgtccagtcaaggcttaagaaaaatcacagtttgagga 336
Query: 121 ggctgagaaccatattgtatactccattgctcttcaggggatgcttctggtctccctccc 180
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 335 ggctgagaaccatattgtacactccattgctcttcaggggatgctcctggtctccctccc 276
Query: 181 taacatccagagagcaggcctgtggtccaggaacatggcctcaggaacatgttgctagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taacatccagagagcaggcctgtggtccaggaacatggcctcaggaacatgttgctagag 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
