NGAATCTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAGGACCTTCCGGTTATACAGAGAAACCCTGTCTCAAACAAA
CAAACAAGAAGTGCCCAAAGTAAAATGAAGAGTCATATAGCCATTATTGT
ATTTTAAAATGGTATAAAATGTTTACATTAAGACTATATCAAAGTGTGGA
GCAGATACTGAAGGAAAACCCATCCAGAGACTGCCCCATCTGGGAATTCA
TCCCATATACAGACACCAAATCCAGACACTATTGTGGATGCCAAGATGTG
TTTGCTGACAGGAGCCTGGTATATATTCTGAGAGGCTGACAAATACAGCT
GCAGATTATCACAGCCATCCATTGGACTGAGTACAGGGACCCCAATGGAG
GAGATAGAGAAAGGACTGAAGAAGCTGAAGCGGTTTACAACCCATAGGAA
GAACAACAATATCAACCAACCAGAACCCCCAGAGTTCCTAGGAACCAAAC
CACCAACCAGAGTACACATGCAGGGACTCATGGCTCCAGAAACATATGTA
GTAGAGAATGGCCTTGACTGGCATCAATGGAAGGAGAGGCTTGTTGCTGC
AGTGTATGGGAATGCCAGGCCGGTGATGCACGAGTGTGTGGGTGGGTAAG
TGAGCCCCCTCATAGAAGCAAGAGGGAGGGAGGACGTGATATGGGGGTTC
TGGAAGGAAAACCCGCAAAGGGCACAATATTTGTAATGTTAA

NNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATACAGCTACAAAATAT
TTCCTCCAACTGATCTAAATAATCAGATTGGTTAATAGTGTTGCTTATGT
GTGTGTTAGGCTGCTACACCCCCCTCCTAGTTCTAATTTGAGCTAGGAAA
TGAGAGAGTGGTGGTATAGCTCAGTGGTAGGGTGCTCACTGGTTGCATCT
GTGACCCCAGTCTCATGAAGAGCACCACAAAAGTCTAGGTAGGGTCAATG
CAAAATTCTTAAGTAAAAGGTACTTGTGTTTGATAGAGATGAGTCAAGAG
GATTTGAGGTAAATTGTCAAATTCACCACAAATTCAACCATAGAACGGGG
CAGAAGAAAGATGCAGAGGAGGACAGAAGGTACCTTTACGTCTGGTTCAC
TTGTCTTATTTTTGTTTTCGAGACAGGGTCTCATTATGTAGCCCTGGATG
GCCTAGACCAGGCTGGGGCTTTGAATTTACAGAGATTCCCCCACCAATGC
CTCCTGAGTCCTTGGAATTGAGGACATACACCTCTACATTTAGGTTTTTG
GGTTTTTTCCACCACTTTTTTTTTTCTATTCTTTGACATTACTAATAGCT
TTTTTTTAAGGGACTTATGTTATAATATTTTGTTTTTAAATTATTCCTAT
GGGATTAATTATTATTCGGTATTCTTAATTGGATTCCCGTTTAAGGCGTT
CCTTTATA

Query= MSMg01no457_c19.g1 MSMg01no457_c19.g1 CHROMAT_FILE:
MSMg01no457_c19.g1 PHD_FILE: MSMg01no457_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:17 2005
         (484 letters)



>mm_chr13_117986297_117987180
          Length = 884

 Score =  847 bits (438), Expect = 0.0
 Identities = 477/500 (95%), Gaps = 16/500 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   catacagctacaaaatatttcctccaactgatctaaataatcagattggttaatagtgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 catacagctacaaaatatttcctccaactgatctaaataatcagattggttaatagtgtt 244

                                                                       
Query: 61  gcttatgtgtgtgttaggctgctacacccccctcctagttctaatttgagctagg----- 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 245 gcttatgtgtgtgttaggctgctacacccccctcctagttctaatttgagctaggaaatg 304

                                                                       
Query: 116 -----------aaatgagagagtggtggtatagctcagtggtagggtgctcactggttgc 164
                      |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gaactattagtaaatgagagagtggtggtatagctcagtggtagggtgctcactggttgc 364

                                                                       
Query: 165 atctgtgaccccagtctcatgaagagcaccacaaaagtctaggtagggtcaatgcaaaat 224
           ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 365 atctgtgaccccagtctcatgcagagcaccacaaaagtctagatagggtcaatgcaaaat 424

                                                                       
Query: 225 tcttaagtaaaaggtacttgtgtttgatagagatgagtcaagaggatttgaggtaaattg 284
           ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||
Sbjct: 425 tcttaagtaaaaggtacttgtgtttgaaagagataagtcaagaggatttgaggtaaactg 484

                                                                       
Query: 285 tcaaattcaccacaaattcaaccatagaacggggcagaagaaagatgcagaggaggacag 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcaaattcaccacaaattcaaccatagaacggggcagaagaaagatgcagaggaggacag 544

                                                                       
Query: 345 aaggtacctttacgtctggttcacttgtcttatttttgttttcgagacagggtctcatta 404
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 545 aaggtacctttacgtctggttcacttgtcttatttttgtttttgagacagggtctcatta 604

                                                                       
Query: 405 tgtagccctggatggcctagaccaggctggggctttgaatttacagagattcccccacca 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgtagccctggatggcctagaccaggctggggctttgaatttacagagattcccccacca 664

                               
Query: 465 atgcctcctgagtccttgga 484
           |||||||| |||||||||||
Sbjct: 665 atgcctcccgagtccttgga 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)