Query= MSMg01no460_k04.b1 MSMg01no460_k04.b1 CHROMAT_FILE:
MSMg01no460_k04.b1 PHD_FILE: MSMg01no460_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:56 2005
(494 letters)
>mm_chr13_31278872_31279766
Length = 895
Score = 880 bits (455), Expect = 0.0
Identities = 485/495 (97%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1 atgagctggtgagcagagttcagccttgtactcagtgctctatcctacaggggcagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagctggtgagcagagttcagccttgtactcagtgctctatcctacaggggcagaaaa 260
Query: 61 ggaaatgggatccaggactgtaagcaatgactataatcaatgatgttgctaatgagttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaatgggatccaggactgtaagcaatgactataatcaatgatgttgctaatgagttta 320
Query: 121 tataaggagaggaagtaagattgtgttgacctactcaaccgtttaccctttccttgtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaggagaggaagtaagattgtgttgacctactcaaccgtttaccctttccttgtggg 380
Query: 181 tgtttcctaatcaaatcaaacgtcagcccacaccctaggagggcaaagaaaaggtattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttcctaatcaaatcaaacgtcagcccacaccctaggagggcaaagaaaaggtattat 440
Query: 241 tgttgtttcactccctgttctattttttttt-ccagaatggacagagaatttcctgcttt 299
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tgttgggccactccctgttctattttttttttccagaatggacagagaatttcctgcttt 500
Query: 300 ggatttataagtctctttattccacaggaacatttaaaatgagcaaaggggccttagttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatttataagtctctttattccacaggaacatttaaaatgagcaaaggggccttagttt 560
Query: 360 gagttctagctctatgtctgtggctgtcagtctgtctatcatgtctatgtgctgtgtgta 419
||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 561 gagttctagctctatgtctgtggctgtcagtctgtctattatgtctatatgctatgtgta 620
Query: 420 ggctctagtacttatgcctatatgttagacacatatccctacatatgactttctagtcac 479
||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ggcgccagtacttatgcctatatgttagacacatatccctacatatgactgtctagtcac 680
Query: 480 tgagacagctataac 494
|||||||||||||||
Sbjct: 681 tgagacagctataac 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_k04.g1 MSMg01no460_k04.g1 CHROMAT_FILE:
MSMg01no460_k04.g1 PHD_FILE: MSMg01no460_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:56 2005
(517 letters)
>mm_chr13_31467902_31468818
Length = 917
Score = 961 bits (497), Expect = 0.0
Identities = 512/517 (99%)
Strand = Plus / Minus
Query: 1 tttgttctgtaatattatttgggatgctgatctcgtctacattcctgtggcagtcttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tttgttctgtaatattatttgggatgctgatctcgtctacattcctgtggcagtcttatt 658
Query: 61 cttgtgtaggacagtttcatgtttggctggactatcataggccagcctcgtgcagagcta 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 657 cttgtgtaggacagtttcatgtttggctcgactatcataggccagcctcgtgcagagcta 598
Query: 121 gccagagtcacagagctgatatttagtggaagtaaagagtcaggactcctttagtctgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gccagagtcacagagctgatatttagtggaagtaaagagtcaggactcctttagtctgtc 538
Query: 181 ttttcttttcaatgccacagattgggtggttacaaaagaaggggtgtttgggtcatagtt 240
||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||
Sbjct: 537 ttttcttttcaatgccacagactgggtagttacaaaagaaggggtgcttgggtcatagtt 478
Query: 241 atgaccccagatcaagggtttcccatccagtgatggcttcttttcttgctgtcagggtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgaccccagatcaagggtttcccatccagtgatggcttcttttcttgctgtcagggtcc 418
Query: 301 caagttggcgctagatatcatggggtgagagacagagaactagtgtgggacacagtcaat 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 caagttggcactagatatcatggggtgagagacagagaactagtgtgggacacagtcaat 358
Query: 361 tgttcttataacaatccagaattagcccagacccatctgaagctgaactgagccattcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgttcttataacaatccagaattagcccagacccatctgaagctgaactgagccattcat 298
Query: 421 gagggcagagctccaatcatcacttaaggattctgtccagttttacctttggatatcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gagggcagagctccaatcatcacttaaggattctgtccagttttacctttggatatcata 238
Query: 481 atcacaatggagattgaatgctaatatgtacttcaga 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atcacaatggagattgaatgctaatatgtacttcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
