Query= MSMg01no461_o18.b1 MSMg01no461_o18.b1 CHROMAT_FILE:
MSMg01no461_o18.b1 PHD_FILE: MSMg01no461_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:43 2005
(431 letters)
>mm_chr13_10079686_10080516
Length = 831
Score = 683 bits (353), Expect = 0.0
Identities = 412/451 (91%), Gaps = 30/451 (6%)
Strand = Plus / Minus
Query: 11 ctatctgactaccgcttaactaacaaaaaagaaagtgagccaattgaaataataggtttt 70
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ctatctgaccagtgcttaactaacaaaaaagaaagtgagccaattgaaataataggtttt 772
Query: 71 tatttgtaaaggactatgtgtgtgctgctaaaggatatcatccatctctctgtgtgtatg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tatttgtaaaggactatgtgtgtgctgctaaaggatatcatccatctctctgtgtgtatg 712
Query: 131 tgtatgtgtgtgtgcactttaaaa------------------------------tgtgtg 160
|||||||||||||||||||||||| ||||||
Sbjct: 711 tgtatgtgtgtgtgcactttaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 652
Query: 161 tgtgtgcagtatatatgtatttcaccacagttagttgctctatacagaaacgtctagtta 220
|||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 651 tgtgtgcagtatatatgtatttcaccacagttcgttgttctatacagaaatgtctagtta 592
Query: 221 gctaggatacctggccttgcttagtaaagccttcactgactggcttgtcctggaagacta 280
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gctaggatacctgaccttgcttagtaaagccttcactgactggcttgtcctggaagacta 532
Query: 281 ctgtagtagccagcctctgtcctatcaaagaagtgctgacttcagtaagaagtcactgac 340
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 531 ctgtagtagccagcctctgtcctatcaaagaagcactgacttcagtaagaagtcactgac 472
Query: 341 aagtgtgtttcctctaagctctactgcatgatccctgaccttccagattgccagactctt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aagtgtgtttcctctaagctctactgcatgatccctgaccttccagattgccagactctt 412
Query: 401 cttcccaggacacttatattaaaaagcagaa 431
|||||||||||||||||||||||||||||||
Sbjct: 411 cttcccaggacacttatattaaaaagcagaa 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_o18.g1 MSMg01no461_o18.g1 CHROMAT_FILE:
MSMg01no461_o18.g1 PHD_FILE: MSMg01no461_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:43 2005
(228 letters)
>mm_chr13_9908051_9908678
Length = 628
Score = 406 bits (210), Expect = e-118
Identities = 222/226 (98%)
Strand = Plus / Plus
Query: 1 tctcctttcttcaggagtcctcccttcttccctcaggcttagctactagggaatgtggcc 60
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tctcctttcctcaggagtcctcccttctttcctcaggcttagctactagggaatgtggcc 260
Query: 61 tcaaggtttgtaaagtgacttcacagtgaggtatgtcagggttgtgagtgatgtgatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaggtttgtaaagtgacttcacagtgaggtatgtcagggttgtgagtgatgtgatgtg 320
Query: 121 gtttgcttgcctagcatgcatgaggccctaggctccgtcccagtccaatataaactgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgcttgcctagcatgcatgaggccctaggctccgtcccagtccaatataaactgtag 380
Query: 181 tgttacatgcttgtaatcattgtatatgggggaggtggaggcagga 226
||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tgtcacatgcttgtaatcattgtatatcggggaggtggaggcagga 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
