Query= MSMg01no465_i07.b1 MSMg01no465_i07.b1 CHROMAT_FILE:
MSMg01no465_i07.b1 PHD_FILE: MSMg01no465_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:39 2005
(463 letters)
>mm_chr13_118620987_118621850
Length = 864
Score = 859 bits (444), Expect = 0.0
Identities = 459/464 (98%), Gaps = 1/464 (0%)
Strand = Plus / Minus
Query: 1 tcacctttatatatgaaatggtaaaataaccaaccaaatgccactaacttagctaattat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 664 tcacctttatatatgaaatggtaaaataaccaaccaaatgccactaaattagctaattat 605
Query: 61 tataggcctatttaaaccatgtttctagagaatatcttcaataaataaaatactgatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tataggcctatttaaaccatgtttctagagaatatcttcaataaataaaatactgatatc 545
Query: 121 agttacagagcaggcatttcagtttcaggccatcaccataagccataccctcagcagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agttacagagcaggcatttcagtttcaggccatcaccataagccataccctcagcagatt 485
Query: 181 tttttgtgaactagaaaatgcaaaggaaagaaggctataattattccaactttttttt-a 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 484 tttttgtgaactagaaaatgcaaaggaaagaaggctataattattccaacttttttttta 425
Query: 240 tttttaatttctatctgaattttctgaactgttttgtgctagaaaaatccccggagcttc 299
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tttcaaatttctatctgaattttctgaactgttttgtgctagaaaaatccccggagcttc 365
Query: 300 agttttctctatgtttacaaatgtttaactgacatacatataaatgcaggacttgataga 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 364 agttttctctatgtttacaaatgtttaattgacatacatataaatgcaggacttgataga 305
Query: 360 tgcacccactgtactggtaacaatctgctctatgggttctgtggcggttggtgggaatga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgcacccactgtactggtaacaatctgctctatgggttctgtggcggttggtgggaatga 245
Query: 420 tgccttatggcacggatctcctcattctcagctttcacttctaa 463
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgccttatggcacggatctcctcattctcagctttcacttctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 864
Length adjustment: 10
Effective length of query: 453
Effective length of database: 854
Effective search space: 386862
Effective search space used: 386862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_i07.g1 MSMg01no465_i07.g1 CHROMAT_FILE:
MSMg01no465_i07.g1 PHD_FILE: MSMg01no465_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:39 2005
(244 letters)
>mm_chr13_118461526_118462170
Length = 645
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 1 tatgactttaggggttagatttttctttcattaacactttgtatgcttccctgttttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgactttaggggttagatttttctttcattaacactttgtatgcttccctgttttata 260
Query: 61 tttagacaagatgtgtatcatcatgaaccaaatatatattgtctggtaatatgtggagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagacaagatgtgtatcatcatgaaccaaatatatattgtctggtaatatgtggagac 320
Query: 121 actacattgtcaaaaggccatggcatgagatgacagaaagacatggcaataaagaaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actacattgtcaaaaggccatggcatgagatgacagaaagacatggcaataaagaaaggg 380
Query: 181 gg-tggggagggtagcttgagaatataaatgctgtaggaagagctaaacccttatgctta 239
|| |||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 381 gggtgggaagggtagcttgagaatataaatgctgtacgaatagctaaacccttatgctta 440
Query: 240 ga 241
||
Sbjct: 441 ga 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
