Query= MSMg01no466_p18.b1 MSMg01no466_p18.b1 CHROMAT_FILE:
MSMg01no466_p18.b1 PHD_FILE: MSMg01no466_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:42 2005
(383 letters)
>mm_chr13_22053275_22054056
Length = 782
Score = 687 bits (355), Expect = 0.0
Identities = 376/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 1 aaagcatggctaacgtagatcattctgtatgatgtataaaacactgatatctgattctaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 474 aaagcatggctaacgtagatcattctgtaggatgtataaaacactgatatctgattctaa 415
Query: 61 tactaggaaaccaaatataagagaaacaagctgtggcttagtcccccctccccctccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 414 tactaggaaaccaaatataagagaaacaagctgtggcttagtcccccct-cccctccctt 356
Query: 121 tggtgaagaagcaaataaccttcctcctagagtttgagagaatctatgttaacaggatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tggtgaagaagcaaataaccttcctcctagagtttgagagaatctatgttaacaggatga 296
Query: 181 gcttcaaaggctccaacatgtggactgaatctaaaggagtgggtattgaagtctaggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gcttcaaaggctccaacatgtggactgaatctaaaggagtgggtattgaagtctaggtca 236
Query: 241 attgttctttccagggtacaaactagaagttgaacagccaagtgtagtgtcatggcacat 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 235 attgttctttccagggtacaaactagaagttgaacagccaagtgtagtggcatggcacat 176
Query: 301 gcttttaatcccagcactctagaggtagaggcaggtatatatctgagttcaaggctagcc 360
||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 175 gcttttaatcccagcactcaagaggtagaggcaggcagatatctgagttcaaggctagcc 116
Query: 361 tggtctatataacggttctagga 383
|||||||||||| ||||||||||
Sbjct: 115 tggtctatataatggttctagga 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 782
Length adjustment: 9
Effective length of query: 374
Effective length of database: 773
Effective search space: 289102
Effective search space used: 289102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_p18.g1 MSMg01no466_p18.g1 CHROMAT_FILE:
MSMg01no466_p18.g1 PHD_FILE: MSMg01no466_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:42 2005
(177 letters)
>mm_chr13_21881333_21881909
Length = 577
Score = 335 bits (173), Expect = 1e-96
Identities = 176/177 (99%)
Strand = Plus / Plus
Query: 1 tcctgaacctgtgatatatgattgcctttagccttactaaaatgtttcttaccagatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgaacctgtgatatatgattgcctttagccttactaaaatgtttcttaccagatacc 260
Query: 61 ttgatgactacccttccacgtgatgtatttttataacttacctacctcacaggcagcctt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ttgatgactacccttccacgtgatgtatttttataacttatctacctcacaggcagcctt 320
Query: 121 gagcccccgactcttctgtcttgatgttaacaacacaacttttctatcagtcctaat 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcccccgactcttctgtcttgatgttaacaacacaacttttctatcagtcctaat 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
