Query= MSMg01no467_f15.b1 MSMg01no467_f15.b1 CHROMAT_FILE:
MSMg01no467_f15.b1 PHD_FILE: MSMg01no467_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:11 2005
(220 letters)
>mm_chr13_99333761_99334380
Length = 620
Score = 385 bits (199), Expect = e-111
Identities = 214/219 (97%)
Strand = Plus / Plus
Query: 1 tagtatatattttgacaaactgtgagatgcaacttgttcactggaatagccaaattgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtatatattttgacaaactgtgagatgcaacttgttcactggaatagccaaattgaat 260
Query: 61 cctactgtatgcacacaccacaagttatttctccactcggagggttacacattaactctg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cctactgtatgcacacaccacaagttatttctccactcggagggatacacattaactctg 320
Query: 121 tgtctgtcagggttgagtaagcgggctctcgctgcagatgtatgtcactgttggttggtt 180
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tgtctgtcagggttgagtaagtgggctcacgctgcagatgtatgtcactgttggttggtt 380
Query: 181 gggttgtttgtttgtttgtttgttttctttgtttttttt 219
|||||||||||||||||||||||||| ||| ||||||||
Sbjct: 381 gggttgtttgtttgtttgtttgttttgtttatttttttt 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_f15.g1 MSMg01no467_f15.g1 CHROMAT_FILE:
MSMg01no467_f15.g1 PHD_FILE: MSMg01no467_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:11 2005
(566 letters)
>mm_chr13_99544431_99545393
Length = 963
Score = 1048 bits (542), Expect = 0.0
Identities = 558/566 (98%), Gaps = 6/566 (1%)
Strand = Plus / Minus
Query: 1 aagatgagtcttcttcaagaacaagtattctaaaccactgagccatctctccagcctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagatgagtcttcttcaagaacaagtattctaaaccactgagccatctctccagcctcta 682
Query: 61 agttaaggcatttgtcacagccttttagttaataatttagctccttaaaatggttatata 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 agttaaggcatttgtcacagccttttagttaataatttagctcctgaaaatggttatata 622
Query: 121 acctttactaaatgaatctatcttcagtttgtttagatttctgaaaggagagttaactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acctttactaaatgaatctatcttcagtttgtttagatttctgaaaggagagttaactac 562
Query: 181 aaatacagaaggcctgtttaataaataaagactgggataaaatattgatcctttagcact 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatacagaaggcctgtttaataaataaagactgggataaaatattgatcctttagcact 502
Query: 241 aagaccaatatagaaccttccttaagtgtaatgcctttctcttctcatgctcatacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaccaatatagaaccttccttaagtgtaatgcctttctcttctcatgctcatacattt 442
Query: 301 ccaggggatgtttttattgcgtgataactgctaagcattaggaatgcaccaatgattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaggggatgtttttattgcgtgataactgctaagcattaggaatgcaccaatgattgaa 382
Query: 361 tgagtgtagcagtcctgctttccgcttttgtgactaaatgaccccagattctacattcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagtgtagcagtcctgctttccgcttttgtgactaaatgaccccagattctacattcta 322
Query: 421 ctgcttttgcactctattttttttattcttcctctttttttcttttccttttcctccccc 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ctgcttttgcactctattttttttattcttcctctttttttcttttcct-----tccccc 267
Query: 481 ccccccctcttgttatgtggccctggttgcctggtactcagtatgtagaccatgctcaca 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccccccc-cttgttatgtggccctggttgcctggtactcagtatgtagaccatgctcaca 208
Query: 541 gtctttttgcttctgcctcctgagta 566
||||||||||||||||||||||||||
Sbjct: 207 gtctttttgcttctgcctcctgagta 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 963
Length adjustment: 10
Effective length of query: 556
Effective length of database: 953
Effective search space: 529868
Effective search space used: 529868
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
