Query= MSMg01no468_i16.b1 MSMg01no468_i16.b1 CHROMAT_FILE:
MSMg01no468_i16.b1 PHD_FILE: MSMg01no468_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:47 2005
(462 letters)
>mm_chr13_89100453_89101314
Length = 862
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%)
Strand = Plus / Plus
Query: 1 ttctggtattttccttgtaaggagaattttaattactgcttcaatattattgcagaatat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ttctggtattttccttgtaaggagaattttaattactgcttcaatatcattgcagaatat 260
Query: 61 aggttctgtttatgtttagtcttctggagttaatgaagtctgtaagtttaagagttatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttctgtttatgtttagtcttctggagttaatgaagtctgtaagtttaagagttatct 320
Query: 121 atagtttccaggttttgtgaatataagttctttaaaggatccctaatgatctgaaacgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtttccaggttttgtgaatataagttctttaaaggatccctaatgatctgaaacgtc 380
Query: 181 tttggaaactagtccaataatctcattttatcctcaatttattaatttaaatcttcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttggaaactagtccaataatctcattttatcctcaatttattaatttaaatcttcttcc 440
Query: 241 tctttttgttattttttttggaacttcatcaaaatcttgtttattgtttctaagaatcag 300
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttttgttattttggctggcacttcatcaaaatcttgtttattgtttctaagaatcag 500
Query: 301 ctttttacttggttgatatgtttcatttagcctttatttcaccaaattatcccctaatat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ctttttacttggttgatatgtttcatttagcctttattttaccaaattatcccctaatat 560
Query: 361 gtttttatgatttggatcaactagatttgagtttgatttcctgtttattgataggctcaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 gtttttatgatttggatcaactagatttgagtttgatttcctgtttattgatagactcaa 620
Query: 421 cttttatcattagatagttttcttgagatcaccttaattttt 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttttatcattagatagttttcttgagatcaccttaattttt 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_i16.g1 MSMg01no468_i16.g1 CHROMAT_FILE:
MSMg01no468_i16.g1 PHD_FILE: MSMg01no468_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:48 2005
(390 letters)
>mm_chr13_89290877_89291666
Length = 790
Score = 723 bits (374), Expect = 0.0
Identities = 386/394 (97%), Gaps = 8/394 (2%)
Strand = Plus / Minus
Query: 1 accttataggaatgatagaaaacacaaactaactgttattataaagaaattttggtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 accttataggaatgatagaaaacacaaactaactgttattataaagaaattttggtttct 456
Query: 61 tctttataaactcctgactagacaaggagagcaattcatgaggataccaggaaccttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctttataaactcctgactagacaaggagagcaattcatgaggataccaggaaccttcta 396
Query: 121 acttatggttcactgttacctgaatcatggtctaagattaaatcccatattaagtccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acttatggttcactgttacctgaatcatggtctaagattaaatcccatattaagtccctg 336
Query: 181 acagcagggcagtgggaaatacaaatggagagttgaagggatgcaagctctgctttctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 acagcagggcagtgggaaatacaaatggagagttgaagggatgcaagctctgctttctca 276
Query: 241 aggaggattc----ttttacattaccctctgacagatctgcttataagccttggctctgt 296
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggaggattcccag----acattaccctctgacagatctgcttataagccttggctctgt 220
Query: 297 aaaagtctcataaccacagtgttgtagtttgggtttatgactgggaagaaacattatgac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaaagtctcataaccacagtgttgtagtttgggtttatgactgggaagaaacattatgac 160
Query: 357 cactgcaactctttgtttgtttgtttttgttttt 390
||||||||||||||||||||||||||||||||||
Sbjct: 159 cactgcaactctttgtttgtttgtttttgttttt 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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