Query= MSMg01no469_i06.b1 MSMg01no469_i06.b1 CHROMAT_FILE:
MSMg01no469_i06.b1 PHD_FILE: MSMg01no469_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:08 2005
(189 letters)
>mm_chr13_56036413_56037000
Length = 588
Score = 329 bits (170), Expect = 7e-95
Identities = 185/190 (97%), Gaps = 3/190 (1%)
Strand = Plus / Minus
Query: 1 aaagacctttcaa-gtctagattatggtcttcaaccataatctaggtttacatgtgtaaa 59
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaagacc-ttcaaggtctagattatggtcttcaaccataatctaggtttacatgtgtaaa 330
Query: 60 acaagtcaacgagtgaacccagggactgagaaagctaaattctttctttttcactaacag 119
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acaagtcaatgagtg-acccagggactgagaaagctaaattctttctttttcactaacag 271
Query: 120 aagtagatgtcctaaggggccccgcaggaagccacagaagaaacacagaaaactacaaca 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagtagatgtcccaaggggccccgcaggaagccacagaagaaacacagaaaactacaaca 211
Query: 180 atgaggccag 189
||||||||||
Sbjct: 210 atgaggccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 588
Length adjustment: 8
Effective length of query: 181
Effective length of database: 580
Effective search space: 104980
Effective search space used: 104980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_i06.g1 MSMg01no469_i06.g1 CHROMAT_FILE:
MSMg01no469_i06.g1 PHD_FILE: MSMg01no469_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:08 2005
(243 letters)
>mm_chr13_55826344_55826986
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Plus
Query: 1 tgagcctcatgctgggccctgattcaccagtccactgggagagaaagccattgtgtttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcctcatgctgggccctgattcaccagtccactgggagagaaagccattgtgtttgg 260
Query: 61 tgattgcagaggagttctaggtgcctggcatctttgatcactgtccaatggtgggtaact 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tgattgcagaggagttctaggtgcctggcatctttgatcactgtccagtggtgggtaact 320
Query: 121 gtcttccatgaactcatttaaaggcatcttgataacctgtgggaacttctgagagtagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttccatgaactcatttaaaggcatcttgataacctgtgggaacttctgagagtagct 380
Query: 181 ttattttgttgaactttggtcttaagagaacagaaggtgactcttaagagtacattgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattttgttgaactttggtcttaagagaacagaaggtgactcttaagagtacattgacc 440
Query: 241 aga 243
|||
Sbjct: 441 aga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
