Query= MSMg01no470_f07.b1 MSMg01no470_f07.b1 CHROMAT_FILE:
MSMg01no470_f07.b1 PHD_FILE: MSMg01no470_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:12 2005
(424 letters)
>mm_chr13_97662670_97663492
Length = 823
Score = 795 bits (411), Expect = 0.0
Identities = 420/423 (99%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 1 aaaaggagatgtagcttatcataggagacacattcagggaaacaaaccaaaccggcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaaaggagatgtagcttatcataggagacacattcagggaaacaaaccaaaccggcaata 447
Query: 61 tttcaaatttcttttagaaatgtttgaaacaaaaaaaaaagttaagtttgaaaagaactc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 446 tttcaaatttcttttagaaatgtttgaaac-aaaaaaaaagttaagtttgaaaagaactc 388
Query: 121 accgtattccaagcataattccaggtcacataactgccacctcccaggagctccttgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 accgtattccaagcataattccaggtcacataactgccacctcccaggagctccttgagc 328
Query: 181 caggtgactgggttctggtaaatctgaccattttctcccttaagtttaccactcggtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caggtgactgggttctggtaaatctgaccattttctcccttaagtttaccactcggtaaa 268
Query: 241 acactgtctctgtgggtcgtctcctgacgtgaaaaacagtgtgaggtcaacaactgttgg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acactggctctgtgggtcgtctcctgacgtgaaaaacagtgtgaggtcaacaactgttgg 208
Query: 301 tgtatgaacttttgcttctggccatgataaaataagagtcagatttagtctaatacctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tgtatgaacttttgcttctggccatgataaaataagagtcagatttagtctaatacctga 148
Query: 361 tgcttcccacccaacaccatgcaaacaaacagacagacagacagacaaaacagcagcagc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 147 tgcttcccacccaacaccatgcaaacaaacagacagacagacagacaaaacagcagcaac 88
Query: 421 aac 423
|||
Sbjct: 87 aac 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_f07.g1 MSMg01no470_f07.g1 CHROMAT_FILE:
MSMg01no470_f07.g1 PHD_FILE: MSMg01no470_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:12 2005
(441 letters)
>mm_chr13_97494795_97495635
Length = 841
Score = 822 bits (425), Expect = 0.0
Identities = 437/441 (99%)
Strand = Plus / Plus
Query: 1 actgtgttcacccgtggcagagtgcgttttaaaagatgagtctgcatttatattggttgc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgttcacccgtggcagagtgtgttttaaaagatgagtctgcatttatattggttgc 260
Query: 61 tatggatcccaggaggtttgcagtcgcctgacttggatttgctcagagatgtctactcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatggatcccaggaggtttgcagtcgcctgacttggatttgctcagagatgtctactcta 320
Query: 121 agctgggttctgatttaagctctttatatccagtctttaattctccaacacaagctattt 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctgggttctgacttaagctctttatatccagtctttaattctccaacacaagctattt 380
Query: 181 cacactcaactgttacagctaaactgttacttctcttaaaatatgccacgttggaaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacactcaactgttacagctaaactgttacttctcttaaaatatgccacgttggaaatca 440
Query: 241 agaaaatgttttgtaaaggaatcttagacaaggagctggcactgcaagtgagtcatgact 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaatgctttgtaaaggaatcttagacaaggagctggcactgcaagtgagtcatgact 500
Query: 301 ttcatttcaggttctttcacaagggctccaagtgtccgctgaacacagtcattccaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcatttcaggttctttcacaagggctccaagtgtccgctgaacacagtcattccaaggc 560
Query: 361 ttgggtggaaggagacacatctaggttcatgttgctggtagagctctggttctctttgat 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgggtggaaggagacacgtctaggttcatgttgctggtagagctctggttctctttgat 620
Query: 421 aactgtctgagggttgtttct 441
|||||||||||||||||||||
Sbjct: 621 aactgtctgagggttgtttct 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
