Query= MSMg01no475_p12.b1 MSMg01no475_p12.b1 CHROMAT_FILE:
MSMg01no475_p12.b1 PHD_FILE: MSMg01no475_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:55 2005
(257 letters)
>mm_chr13_37736415_37737071
Length = 657
Score = 493 bits (255), Expect = e-144
Identities = 255/255 (100%)
Strand = Plus / Minus
Query: 1 tgaactttaaactgattgcaacactctgagttatcagtgtgttcttggattattcaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgaactttaaactgattgcaacactctgagttatcagtgtgttcttggattattcaattt 396
Query: 61 ctgggctgatcttatctcctgtttcccaagacgcgtcggaaaggttctgtgcccatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctgggctgatcttatctcctgtttcccaagacgcgtcggaaaggttctgtgcccatggct 336
Query: 121 tcacgggcctttcttttctcctgccagggttccatgttcccagagcccgtgcagatgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcacgggcctttcttttctcctgccagggttccatgttcccagagcccgtgcagatgggg 276
Query: 181 aaagttttatatagtacaaattagcacctttgggcctctcccttgcctatagcacattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaagttttatatagtacaaattagcacctttgggcctctcccttgcctatagcacattct 216
Query: 241 tcatggtttggaaga 255
|||||||||||||||
Sbjct: 215 tcatggtttggaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_p12.g1 MSMg01no475_p12.g1 CHROMAT_FILE:
MSMg01no475_p12.g1 PHD_FILE: MSMg01no475_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:55 2005
(238 letters)
>mm_chr13_37562037_37562674
Length = 638
Score = 352 bits (182), Expect = e-101
Identities = 236/284 (83%), Gaps = 47/284 (16%)
Strand = Plus / Plus
Query: 1 agcagtttctccactcctgaga-atatgtaccttgggactgttaacctatgattacacag 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 154 agcagtttctccactcctgagacatatgtaccttgggactgttaacctatgattacacag 213
Query: 60 atggggctggggt----------------------------------------------g 73
||||||||||||| |
Sbjct: 214 atggggctggggtatgagccagtgtgaaagctatccagcttgccagatggggctggggtg 273
Query: 74 tgagccagtgtgaaagctatccagcttgccgtctaattgaaatgtccaacagtttctgct 133
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 274 tgagccagtgtgaaagctatccagcttgccgtctaattgaaatgttcaacagtttctgct 333
Query: 134 tcctttccagctctgatcttaacacacacaaatgacaagatggattgagcctggttcctt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcctttccagctctgatcttaacacacacaaatgacaagatggattgagcctggttcctt 393
Query: 194 atccccaactggggtagcaagcagggaagcacatgacgatgtgc 237
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atccccaactggggtagcaagcagggaagcacatgacgatgtgc 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
