XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGGATCCGCGGAATTC
TCAAATAGCTAACAAAAATTAAATCTACCATATGACCAGTGATACCTCTC
TTTGGCATTTTCCCAGAACATGAAATATTCTGCTGCAAATATTCCTGCTC
AGCCATTGTCATTGGCATTCTATTCATAATAGCAGGGACATGGGAACAAC
CTAAATATTTTTCAACTGGTGCTCTTGAATGGTCATTGAAAATGTTGTCC
ATACATACTATGGAATAGTATTCAACTGCAAAGAAAATTAAAATCCTGAA
GTTTTCAGATTAATGGATGGAATTAGAAAAATACTGTTCTAAATGAGGTA
ACCCAAACCCAGAAAGACAAATGCTACAAGTTTTCTCTTATTTATGGATC
CTATCTCTAAATCTTTAAATGTGAACCAATAACATGGAGCAACGGCACAA
ACTAGGAAAGTAAAAAGAAACATGGGGCCGGGAAAGGAGACGACTTTTTG
GAAGAGAGGAAAGTCGAACACAGGTGCCATGACAGGGAACAAAGGACCAC
AGCAACTCATATAAAGGAAAACACTTAATTGGGGCTGGTTTATAGTTTCA
GAGATTTAGTTCACTATCATCATGGCAGGGAGTTTGGCAGTGCATGGGGC
AGACATTGTGTTGGAGCTGAAAGTTCTACATCTTGATCCTGTGGACAGCG
GAGCAGACTATGTCN

NCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATCTCCAGTGTCAAGCT
GCCATCTTATGCAATGTTTTAATCTTTTGTTTGGATAAACTATGTAAATC
AGATATATTACTGGAAGGTGGGTATTTTAATAGACTTTCTAGACTGTGGA
TAATCTTCAACTCTACACTAAAATTGTATAGTAGTTTCCTACCTACCTAC
CATGCAGGTCTCCACTATCATCTTCTATTTTTGTGGCTGGTGCTCAAATC
CAGGACTTTTGAATACCAGGCAAGCTCTCTAACAACTGAGACCCCATCCT
CCCCTTAGCCCCAAACTATAAAGAACAGCTTATGTGGTATGATAATGATC
TGTCAGATAAACAAAGAAAAAATATTTTTAAAACCACAAGGTAATAAAGA
CAAACATAATTACATGAAAAGCACACTAACAGCAAACTGAAAAAAAAAAA
AAAACCAACCAAAAACCCCAGTTCCAAGTGGCAATTTAAAAATCTCTTTC
GATGAAGGTAGCAGATATTCTTATAGAAACATCAAATTTAAAGATAATTT
CCATTACTTTGGAGTTTGAATCCTACTAAAAGCATTTCCAAGCAAGTGAG
CTTGAGGAAAGACGGCAGAATCTCATTAAGATATTTTCTTAAGTTTTCTA
CTCGCAGCCTGGAGTAACCACTATACATTCCCTATGGACCAAGTGTTTTT

Query= MSMg01no477_d06.g1 MSMg01no477_d06.g1 CHROMAT_FILE:
MSMg01no477_d06.g1 PHD_FILE: MSMg01no477_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:35 2005
         (621 letters)



>mm_chr13_17898286_17899300
          Length = 1015

 Score =  988 bits (511), Expect = 0.0
 Identities = 532/541 (98%), Gaps = 6/541 (1%)
 Strand = Plus / Minus

                                                                        
Query: 81   ggaaggtgggtattttaatagactttctagactgtggataatcttcaactctacactaaa 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ggaaggtgggtattttaatagactttctagactgtggataatcttcaactctacactaaa 956

                                                                        
Query: 141  attgtatagtagtttcctacctacctaccatgcaggtctccactatcatcttctattttt 200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  attgtatagtagtttcctacctacctaccatgcaggtctccactatcatcttctattttt 896

                                                                        
Query: 201  gtggctggtgctcaaatccaggacttttgaataccaggcaagctctctaacaactgagac 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  gtggctggtgctcaaatccaggacttttgaataccaggcaagctctctaacaactgagac 836

                                                                        
Query: 261  cccatcctccccttagccccaaactataaagaacagcttatgtggtatgataatgatctg 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  cccatcctccccttagccccaaactataaagaacagcttatgtggtatgataatgatctg 776

                                                                        
Query: 321  tcagataaacaaagaaaaaatatttttaaaaccacaaggtaataaagacaaacataatta 380
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 775  tcagataaacaaagaaaaaatatttttaaaaccacaaggtaatacagacaaacataatta 716

                                                                        
Query: 381  catgaaaagcacactaacagcaaactgaaaaaaaaaaaaaaaccaaccaaaaaccccagt 440
            |||||||||||||||||||||||||||  ||||||||||||||   || |||||||||||
Sbjct: 715  catgaaaagcacactaacagcaaactg--aaaaaaaaaaaaac---cc-aaaaccccagt 662

                                                                        
Query: 441  tccaagtggcaatttaaaaatctctttcgatgaaggtagcagatattcttatagaaacat 500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tccaagtggcaatttaaaaatctctttcgatgaaggtagcagatattcttatagaaacat 602

                                                                        
Query: 501  caaatttaaagataatttccattactttggagtttgaatcctactaaaagcatttccaag 560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  caaatttaaagataatttccattactttggagtttgaatcctactaaaagcatttccaag 542

                                                                        
Query: 561  caagtgagcttgaggaaagacggcagaatctcattaagatattttcttaagttttctact 620
            |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 541  caagtgagcttgaggaaagatggcagaatcttattaagatattttcttaagttttctact 482

             
Query: 621  c 621
            |
Sbjct: 481  c 481


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1015
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1005
Effective search space:   614055
Effective search space used:   614055
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)