XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AACAGTTCCTCCTTTACTCCCCATCTCTCTTCTGCCTCAGCTAGCATGCT
ATTGTCATTTACAGCAGAAGGATAAGATTATTTTGAAATTGCAAGATCCC
AGGTCAAATGGTTTCCAGCAGTTTCATAGACCTCAGCACTGGCCTATAGA
CAAAAGCTAAGAGAGTCTCACCTGCCTGCAAAGGTAATGTTCCAGAAACT
TCTGTGGGCCTCTGCTCTCTTACAGAACAAAAAAGTCACCAGCATTTCCT
GTAAGTTTAAGATTATACTAAGGCGGTTCTGTGAAGAGAACGTGTGCTGT
ATAAGTGTGAGAACTTGTGTTTGGTCACCAGGACCCTTGTAAAAGCAGAG
TATTGAAGCATAGATCTGTAGCCCTGAAGCTTGGTGAGGAGAGAGAGGTA
ACAGAAGACCTTGGGGGCGTTCAATTGAGCGAGTCATTCTAGTTAAATGT
CAAGCTCCATGCATAGTGAGAAGGCTGTCTCACCCACTAAGGTTGAGTGT
GATAAAAGAAGATACTGAGCATTGACCGTGGCCTTTTCATGTGCACACAT
GAGGTACAACACCCTCACACAAATGTGAACACACACACACACACACACAC
ACACACACACAATATGATCTCAGTACTCACATTGGTATTGTGGAGAAGCA
AATGAGGAAGTAGGGGGAGGGGCTA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATCTTTGTCTTTTACCTGCTTGCCATTGTGTGG
GTTACAGCCAACTATCACACACAGATTTTTATGTGGGTGCTATGGATCTG
AACTCAGGTCTGCTTGCTCATGGAGTATGCAGTTTACTGCTTGAACCATC
TCAAGGACTTCATAACATACTTCATAATTAAATATCTTGATAAAGTTCTC
TACAAATCTCATAGCATCTACAAATTGAGATGCTGCCACCAATACAAATT
TGCAAAATGGAAAAATATTCCTTTAAACTATTCATTATAGAGGACCTGAA
GGTGACCACAAACAGTGCAGGGGAAACAAATCACATAACAAATCTATCCA
CCTGAACATGCTGCTATATAGCATGGTGAAGCTTTGTTAAAGTACCCCAT
ACTTAAATGAGGGATGTAACAAAATAAAATTATGTTTTTTTATTAGATAC
ATTTATTTTTATTTTATAGGTATAGATATGTCTATACTTCAGTAGTCCAA
AAGATGGTGTGGAATCTCCCAGAACTAGAGATATAGATGACTGTGAATCA
TGTGGTTGCTGGAAATTATCTGAAAAAGCAAAAGGGCTCTTAAGGGCTAA
GCCATTTCTCTAGCTCTCTATGTTAGCTTTGTTTCTTAAAATGCCTTTTG
TTTTAATTTATACGTTTTTTTATA

Query= MSMg01no478_c06.g1 MSMg01no478_c06.g1 CHROMAT_FILE:
MSMg01no478_c06.g1 PHD_FILE: MSMg01no478_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:47 2005
         (657 letters)



>mm_chr13_5598201_5599257
          Length = 1057

 Score = 1201 bits (621), Expect = 0.0
 Identities = 645/653 (98%), Gaps = 1/653 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctttgtcttttacctgcttgccattgtgtgggttacagccaactatcacacacagatt 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttgtcttttacctgcttgccaatgtgtgggttacagccaactatcacacacagatt 260

                                                                       
Query: 61  tttatgtgggtgctatggatctgaactcaggtctgcttgctcatggagtatgcagtttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatgtgggtgctatggatctgaactcaggtctgcttgctcatggagtatgcagtttac 320

                                                                       
Query: 121 tgcttgaaccatctcaaggacttcataacatacttcataattaaatatcttgataaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttgaaccatctcaaggacttcataacatacttcataattaaatatcttgataaagtt 380

                                                                       
Query: 181 ctctacaaatctcatagcatctacaaattgagatgctgccaccaatacaaatttgcaaaa 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctacaaatctcatagtatctacaaattgagatgctgccaccaatacaaatttgcaaaa 440

                                                                       
Query: 241 tggaaaaatattcctttaaactattcattatagaggacctgaaggtgaccacaaacagtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaaaaatattcctttaaactattcattatagaggacctgaaggtgaccacaaacagtg 500

                                                                       
Query: 301 caggggaaacaaatcacataacaaatctatccacctgaacatgctgctatatagcatggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggggaaacaaatcacataacaaatctatccacctgaacatgctgctatatagcatggt 560

                                                                       
Query: 361 gaagctttgttaaagtaccccatacttaaatgagggatgtaacaaaataaaattatgttt 420
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagctttgttaaaataccccatacttaaatgagggatgtaacaaaataaaattatgttt 620

                                                                       
Query: 421 ttttattagatacatttatttttattttataggtatagatatgtctatacttcagtagtc 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttt-attagatacatttatttttattttataggtatagatatgtctatacttcagtagtc 679

                                                                       
Query: 481 caaaagatggtgtggaatctcccagaactagagatatagatgactgtgaatcatgtggtt 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 680 caaaagatggtgtggaatctcccagaactagagatatagattactgtgaatcatgtggtt 739

                                                                       
Query: 541 gctggaaattatctgaaaaagcaaaagggctcttaagggctaagccatttctctagctct 600
           |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 740 gctggaaattatctgaaaaagcaaaaggtctcttaagagctaagccatttctctagctct 799

                                                                
Query: 601 ctatgttagctttgtttcttaaaatgccttttgttttaatttatacgtttttt 653
           || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctttgttagctttgtttcttaaaatgccttttgttttaatttatacgtttttt 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)