Query= MSMg01no478_c14.b1 MSMg01no478_c14.b1 CHROMAT_FILE:
MSMg01no478_c14.b1 PHD_FILE: MSMg01no478_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:49 2005
(524 letters)
>mm_chr13_39695232_39696151
Length = 920
Score = 706 bits (365), Expect = 0.0
Identities = 412/434 (94%), Gaps = 12/434 (2%)
Strand = Plus / Minus
Query: 1 gaaagaaaaccaaacattaggttttagtctaagaatttaagtgctttcttaagcccacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaaagaaaaccaaacattaggttttagtctaagaatttaagtgctttcttaagcccacca 548
Query: 61 atataatcagatttatatttatttttacagaaatgtttgctctgctaatgcatgcctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atataatcagatttatatttatttttacagaaatgtttgctctgctaatgcatgcctaat 488
Query: 121 caaataatgtgtgttgcgtgatggaaacttcaaataaagttcttaaggctgtcaaaaagt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 caaataatgggtgttgcgtgatggaaacttcaaataaagttcttaaggctgtcaaaaagt 428
Query: 181 aaataagctaacgataat-gnatttctttgttgcccagtggacctcataaatgattgggt 239
|||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaataagctaacgagaattgtatttctttgttgcccagtggacctcataaatgattgggt 368
Query: 240 tggacatggtgcagttagaaagaggcacatagacccacatatgcatgcacatgcaccctt 299
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 tggacatggtgcagttagaaagaggcacatagacccacatatgcatgcac------cctt 314
Query: 300 agcactttatcctctggccttcacccaccccccaaattttgtttttaccttctgatgatg 359
||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 313 agcactttatcctctggccctcacccacccccaaaattttatttttaccttctgatgatg 254
Query: 360 tgtgttcagtttttaaaatgccatatattttacaatctattctct-----tttttttcca 414
| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 253 taagttcagtttttaaaatgccatatattttacaatctattctctcttttttttttttca 194
Query: 415 tttggtttattttt 428
|||| |||||||||
Sbjct: 193 tttgatttattttt 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 920
Length adjustment: 10
Effective length of query: 514
Effective length of database: 910
Effective search space: 467740
Effective search space used: 467740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_c14.g1 MSMg01no478_c14.g1 CHROMAT_FILE:
MSMg01no478_c14.g1 PHD_FILE: MSMg01no478_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:49 2005
(668 letters)
>mm_chr13_39550000_39551067
Length = 1068
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%)
Strand = Plus / Plus
Query: 1 ctgttagagggaaagcagcattggctcattactcccctgtctgcaaagcagcattagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttagagggaaagcagcattggctcattactcccctgtctgcaaagcagcattagtcc 260
Query: 61 ccccatgtattcaaggctgcacatgtggtagggctttgtatatacagaggactgtgttta 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ccccatgtattcaaggctgcacatgtggtagggctttgtatatacagagggctgtgttta 320
Query: 121 gctcacaactaattgtttagttgggcatttttgctagtgatatccttgcagagaatggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcacaactaattgtttagttgggcatttttgctagtgatatccttgcagagaatggaa 380
Query: 181 agctgcactgcaaaccaaaaacatattttatgtttaggattactccccctagtttggctc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgcactgcaaaccaaaaatatattttatgtttaggattactccccctagtttggctc 440
Query: 241 agttgttaggtggtaggaactttaagaggttacttcccttaaaagtctgaatccttggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgttaggtggtaggaactttaagaggttacttcccttaaaagtctgaatccttggga 500
Query: 301 cagtatccttgaaggggttgatgggtcccagcctgtctcttgtctttcctaacctgacca 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 cagtatccttgaaggggttgatgggtcccagcctgtctcttgtcttttctaacctgacca 560
Query: 361 tgagatgagcagttaaattctggctgttgtatactgcccctctatcagaggccccaaagt 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagatgaatagttaaattctggctgttgtatactgcccctctatcagaggccccaaagt 620
Query: 421 catgattccatataaccataggctagaatgtctccaactgtgtggcaggataaacttgtc 480
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 catgattccatgtaaccataggctagagtgtctccaactgtgtggcaggataaacttgtc 680
Query: 481 catgagttacttagagacaagacacagaagtgagcaagaaaccattatgccccttcttaa 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgagttacttacagacaagacacagaagtgagcaagaaaccattatgccccttcttaa 740
Query: 541 tgcatttacttttgtaagtttggaaaaatgcaagtcattttacaatatacttttaaagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcatttacttttgtaagtttggaaaaatgcaagtcattttacaatatacttttaaagat 800
Query: 601 catagaaatccatttgacaaacaaatggggtgaagagatgacatggccagttgtttagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catagaaatccatttgacaaacaaatggggtgaagagatgacatggccagttgtttagga 860
Query: 661 atacccca 668
||||||||
Sbjct: 861 atacccca 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
