Query= MSMg01no478_j10.b1 MSMg01no478_j10.b1 CHROMAT_FILE:
MSMg01no478_j10.b1 PHD_FILE: MSMg01no478_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:20 2005
(272 letters)
>mm_chr13_112157272_112157944
Length = 673
Score = 453 bits (234), Expect = e-132
Identities = 264/274 (96%), Gaps = 3/274 (1%)
Strand = Plus / Plus
Query: 1 cactaagacaaaaatacataaactgttcatcttttgttaaacttaccattaagcattaat 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cactaagacaaaaatacataaactgttcatcttttgttaaacttat-attaagcattaat 259
Query: 61 gatagaaacaaaccaacatgctcaaaatatacacaaaaa-tactgatttttctaaacttg 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 gatagaaacaaaccaacatgctcaaaatatacacaaaaaatactgatttttctaaacttg 319
Query: 120 atgaaagaatcatattttgttaacatctgaacagtaactagggaaatattaatcaatata 179
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
Sbjct: 320 atgaaagaatcatatttcgttaacatctgaacagtaactagggaaatattaatcaagaca 379
Query: 180 tattaaactagtcataattacagttgtgcatgatagttgcatgaagaaatcagtcaacct 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattaaactagtcataattacagttgtgcatgatagttgcatgaagaaatcagtcaaccc 439
Query: 240 gttttact-catctgcatctgtagcatttcacag 272
|||| || |||||||||||||||||||||||||
Sbjct: 440 gtttgaccacatctgcatctgtagcatttcacag 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 673
Length adjustment: 9
Effective length of query: 263
Effective length of database: 664
Effective search space: 174632
Effective search space used: 174632
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no478_j10.g1 MSMg01no478_j10.g1 CHROMAT_FILE:
MSMg01no478_j10.g1 PHD_FILE: MSMg01no478_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:20 2005
(632 letters)
>mm_chr13_112355778_112356809
Length = 1032
Score = 640 bits (331), Expect = 0.0
Identities = 361/375 (96%), Gaps = 8/375 (2%)
Strand = Plus / Minus
Query: 1 ctccaaaatgaaggcagatgttgtgaggcctgactgtaagtcagcacttaataggctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctccaaaatgaaggcagatgttgtgaggcctgactgtaagtcagcacttaataggctgag 312
Query: 61 gccagaggagcagcagtgggattctgactctgtgatacaaaaccaaaaccagacaacggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gccagaggagcagcagtgggattctgactctgtgatacaaaaccaaaaccagacaacggc 252
Query: 121 aagaaagccagtaaaactactctgcaaaattcaggctccatgcgaggtgtggtggtggca 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagaaagccagtaaagctactctgcaaaattcaggctccatgcgaggtgtggtggtggca 192
Query: 181 cacaccttttatcccagcacttaggaggcagaggcaggtagatctatctctaagtctgag 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 191 cacaccttttatcccagcacttaggaggcagaggcaggcagatctatctctaagtctgag 132
Query: 241 gtt----tttttggtctgtagagctagtttcaggacagccagggctgtacagagaaaccc 296
| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gctagcct----ggtctgtagagctagtttcaggacagccagggctgtacagagaaaccc 76
Query: 297 tgtctcaaaaagccacaaacaagacaaaaccgagcaacatccaggtgtgctgagctggaa 356
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 75 tgtctcaaaaagccacaaacaagacaaaaccaaacaacatccaggtgtgctgagctggag 16
Query: 357 cacagtaagtgtctt 371
|||||||||||||||
Sbjct: 15 cacagtaagtgtctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
