Query= MSMg01no480_b20.b1 MSMg01no480_b20.b1 CHROMAT_FILE:
MSMg01no480_b20.b1 PHD_FILE: MSMg01no480_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:19 2005
(618 letters)
>mm_chr13_43115197_43116213
Length = 1017
Score = 953 bits (493), Expect = 0.0
Identities = 589/631 (93%), Gaps = 19/631 (3%)
Strand = Plus / Plus
Query: 6 ggaattctgtgcactgctgcattagaagtgggaaagaaagcaatatcattctcccaggaa 65
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 206 ggaattctgtgcactgatgcattagaagtgggaaagaaagcaatattattctcccaggaa 265
Query: 66 gaaagtctgactctacagagatgcaaactcaagagggttcagctccaggtggaacaggaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaaagtctgactctacagagatgcaaactcaagagggttcagctccaggtggaacaggaa 325
Query: 126 tatacccatttcctggactcactagtgaagagctgtcagtcttggaggccctcttgggca 185
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 326 tatacccatttcctggactcactagtgaagagctgtcagtctttgaggccct-ttgggca 384
Query: 186 ggaagctagacatgctgaggacaatgggaacggggtggggcattctcttgct-------- 237
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 ggaagctagacatgctgaggacaatgggaacggggtggggcattctcttcctctctctct 444
Query: 238 --ctctctctctctctctct------ctctctctctctctgtgtgtgtgtgtgtgtgtgt 289
|||||||||||||||||| |||||||||||||| | | | | | | | | | |
Sbjct: 445 ccctctctctctctctctctccctccctctctctctctctctctctctctctctctcttt 504
Query: 290 gtgtgtgtgtgtgtgtgtgtgtg--aatctctataagtatgtgcatctctatgtgtgtgt 347
||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 505 gtgtgtgtgtgtgtgtgtgtgtgccaatctctatgagtgtgtgcatctctatgtgtgtgt 564
Query: 348 atgcatgcttcattcatatgcctcaaacatgcacctcttatgtgtgtctcatacctgtac 407
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 565 atgcatgcttcattcatatgcctcaaacgtgcacctcttatgtgtgcctcatacctgtac 624
Query: 408 ctcatgtgtatgccccaagtgtgtgcaggtacttgaagaggccaaaagagggtgtctgtt 467
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctcatgtgtatgccccaagcgtgtgcaggtacttgaagaggccaaaagagggtgtctgtt 684
Query: 468 cccctggagctgagctggtgttaccagcacttatgagccacctgacatgggtgctgggaa 527
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcctggagctaagctggtgttaccagcacttatgagccacctgacatgggtgctgggaa 744
Query: 528 ctggactcaggtcctctggaaaagtagcaagtggtcttaactactgagccttccctccca 587
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccagactcaggtcctctggaaaagtagcaagtggtcttaactactgagccttccctccca 804
Query: 588 ccccaggcccaagcattaaagatgggacagt 618
|||||||||||||||||||||||||||||||
Sbjct: 805 ccccaggcccaagcattaaagatgggacagt 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space: 612256
Effective search space used: 612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_b20.g1 MSMg01no480_b20.g1 CHROMAT_FILE:
MSMg01no480_b20.g1 PHD_FILE: MSMg01no480_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:19 2005
(625 letters)
>mm_chr13_43287038_43288063
Length = 1026
Score = 1145 bits (592), Expect = 0.0
Identities = 610/616 (99%), Gaps = 1/616 (0%)
Strand = Plus / Minus
Query: 11 acaacccaaaggccaggcagtggtagtgaatgcctttaatcccagcccttgggaggcaga 70
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1026 acaacccaaaggccaggtagtggtggtgaatgcctttaatcccagcccttgggaggcaga 967
Query: 71 ggcaggtggatttctgagttcgaggccagcatggtctacagcgtgagttccaggacagcc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ggcaggtggatttctgagttcgaggccagcatggtctacagcgtgagttccaggacagcc 907
Query: 131 agagctacacagataaaccctatctcgaaacaaaaacaaaaaaaccaaaaacaacaacaa 190
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 agagctacacagataaatcctatctcgaaacaaaaacaaaaaaaccaaaaacaacaacaa 847
Query: 191 aacaaaaaacaaaaccaagagggaccctaaggtgat-gggggggggtgcttgtgtacaat 249
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 846 aacaaaaaacaaaaccaagagggaccctaaggtgatggggggggggtgcttgtgtacaaa 787
Query: 250 gttaaggcttagtaaaaccaccccaagccactaataaagaacgaaagagtctcgatcagg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gttaaggcttagtaaaaccaccccaagccactaataaagaacgaaagagtctcgatcagg 727
Query: 310 gctaggttagggtaaggctagagacccacttgggaagggttaatcataattgcttcagat 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gctaggttagggtaaggctagagacccacttgggaagggttaatcataattgcttcagat 667
Query: 370 attccaccagcaaggacgaagcagatctatgacccggtgtcatgcagtcagcctaaagac 429
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 actccaccagcaaggacgaagcagatctatgacccggtgtcatgcagtcagcctaaagac 607
Query: 430 ccactatgttcttgggtttcatctgggacaagttcaccaacagatgaagtggcttttaag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccactatgttcttgggtttcatctgggacaagttcaccaacagatgaagtggcttttaag 547
Query: 490 tgtgctaagctaacttgatactcaggttcctggcacaaagcaggagacagaactggcccc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtgctaagctaacttgatactcaggttcctggcacaaagcaggagacagaactggcccc 487
Query: 550 ggaatagcagctgtgtggaaatccagctgtgaagggacaacatgtagcaggtcacaaagg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggaatagcagctgtgtggaaatccagctgtgaagggacaacatgtagcaggtcacaaagg 427
Query: 610 aggtgggagggaaaag 625
||||||||||||||||
Sbjct: 426 aggtgggagggaaaag 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
