NAACCAATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGATCCG
CGGAATTCTGGAATTTTTCTTTCTTTAAGAAAAAACAGAAATATTTTAAG
AATATGTTTTCATTTTAATCCCAGGAGTAGGGACATAGGTCAACTTTGCA
ACAACTAACTATGATTGGCCTTGTGCTCTAGCAGAAGCATGATTTTGCCA
GCTTCTGTGATTGTATGATGTTTGGGGTTCTGAGAACTTTTCAGAGGGTA
TAAAAATACTAGGGCCCTAGAGGTGGGGTTGGTGGTCATTCAGTAAGGTT
GGTTGTGGTTCGTTAGTAGTTGTGCTCTTAGAAGAAAGAAATTAGATTCA
AAGATATCCCTCTCTCTCTCCCTCTGTCCTTCTTTCTCTCCTATCTAGTA
ATAGGGGATTAAATTTGGGGGATAAAAGATGAGAAAAAGAAGACCCACAC
AGTAGCAAAGACCAGCTAGTTTACTTGAAGTCTTTGAGTTCAAGAAACTG
TAACTTTTCTAGCTCTAGCCATTGACCTGAAATTTTTATAATTTCCTTTG
TCTTAACAACTGAATAATATTCCATTGTATAAATGTACCACATTTTCCTT
ATCAATTCATCAGCTGATAAACACCTATGCTATTTCCAAGCTCTGACTCT
TATGAATAGAATAACATTGAACATGGATGAGCAAGTGTCTCTGTAGTAGT
ATGTAGGATCCTTTGGGTATATGCTGTCAAAGG

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGAAATTCTCCAGGTGCTAGTTAAATGCCTCCA
GAAGGCCTGGGGGCACTGGTGACTCCCTCCAAGGAGTTCTGTAGTTTACA
AGTGACCTGTCAGTCAAAGGCCCTCATTAAGTAGATGCTGCAGAATGGGA
TCTCCCAGAGGCTCTTAGTGAGAAGGATATGGTAAGGCAGGAGTGATAAT
GCTTCTTGAATCTAGGTTGAGTTTTGCTTCTTTAAAACCTCAGTGATAGT
TAAGATCATTTCTAATGTGTCNCTTTTGTTATTACTACAAGCCATTCATT
TTATATATCTTTTAATTTTTTGCTGTGTATATGTTTGTGTATGTATATTT
GTATGTATGCATACATGCGTGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTATGTATGNATGNNNNNNNNNNNNNNNNNTNNNTNNTNNNNNN
NTNTTNTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTT
TTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTNNNNTTT
TTTTTTTTTTTTTTTTTTTTTTTNTNTTNTNNNTTTTTTTTTATTTTTNN
TTTTTTTTTTCTNTTTTNTTTTTTTTCTTT

Query= MSMg01no480_g22.g1 MSMg01no480_g22.g1 CHROMAT_FILE:
MSMg01no480_g22.g1 PHD_FILE: MSMg01no480_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:44 2005
         (388 letters)



>mm_chr13_25129219_25130007
          Length = 789

 Score =  669 bits (346), Expect = 0.0
 Identities = 366/373 (98%), Gaps = 1/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtgctagttaaatgcctccagaaggcctgggggcactggtgactccctccaaggagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgctagttaaatgcctccagaaggcctgggggcactggtgactccctccaaggagtt 260

                                                                       
Query: 61  ctgtagtttacaagtgacctgtcagtcaaaggccctcattaagtagatgctgcagaatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtagtttacaagtgacctgtcagtcaaaggccctcattaagtagatgctgcagaatgg 320

                                                                       
Query: 121 gatctcccagaggctcttagtg-agaaggatatggtaaggcaggagtgataatgcttctt 179
           |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gatctcccagaggctcttagtgaagaagggtatggtaaggcaggagtgataatgcttctt 380

                                                                       
Query: 180 gaatctaggttgagttttgcttctttaaaacctcagtgatagttaagatcatttctaatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatctaggttgagttttgcttctttaaaacctcagtgatagttaagatcatttctaatg 440

                                                                       
Query: 240 tgtcncttttgttattactacaagccattcattttatatatcttttaattttttgctgtg 299
           |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtctctttagttattactacaagccattcattttatatatcttttaattttttgctgtg 500

                                                                       
Query: 300 tatatgtttgtgtatgtatatttgtatgtatgcatacatgcgtgtatgtatgtatgtatg 359
           |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 501 tatatgtttgggtatgtatatttgtatgtatgcatacatacgtgtatgtatgtgtgtatg 560

                        
Query: 360 tatgtatgtatgt 372
           |||||||||||||
Sbjct: 561 tatgtatgtatgt 573


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 789
Length adjustment: 9
Effective length of query: 379
Effective length of database: 780
Effective search space:   295620
Effective search space used:   295620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)