XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAATTCCATG
TTTTAGTTTCAAATGAGGTCAAAAGATTTGTCCTTTGTTGGAGTTTTCTC
ACACACATTCAGAAATCTCCTCACATGACTGAATTCTTGCACTGTGTCCT
CACACTGTATCATGAGACACATGATCCAGTGATCAGGACAAAAGTTAGCC
ATCTTTGCCTGGTGTATAGACACATGTTGGCTAATTGGTTTCCCTGGATA
ATCAGTTATTAACCACCACATGTACATACTCTGTGTGGTATATCACTTTA
TGTTCAAAGACTGTCCCATGATGTATATTGAACAAAATAAGTCATACCGA
ATTCACCTGACCTTTTCTACTCTTCACTCAGAAGGCACATAGACATCCTG
AGAAAAATAAACCCCCAAAGCCATAAGGTATCATGTATGAAATCTATTAG
AGCAAGGATCATTTATTGCCATCAAATGTGTAAACTGTGTGAGCGGGATG
TGGAAGAGAGCCTTCAGTGTATTTTTCAAAGCATTTGAATGTTTCCGATG
AATGAGGAATGATGTAAACTGATACTGGAGGAGTAAACTGGAAAGAGACT
ACCATAGTGTGTTGTCATCCAGGCTTGCATTTTACATTTAACCACTGCAA
GTGTTAAGTCTGAAGCAAAGATATACTCTATTACCACTGTCTTATAAAAG
ACTATGTGGATAACACACTACAATGAATGGCCTACAAGTCAATGTGAGGT
AATCCTTTAGGAGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGTAGGCTTCTTGCATGTTCATGGGCATCTCTTT
CTTTATGTTAGGGAAGTTTTCATCTATTATTTTGTTGAAGATATTACTGA
GCCTTTAAGTTGGGAATCTTCGCTCTCTTCTATATCTATTATCCTTACAT
TTGGCCTTCTCATTGTGTCCTGGATTTCCTGGATGTTTTAGATTAGGGTC
TTTTTTCATTTTGCATTTTCTTTGATTGTTGTAGCAATGTTTCCTATGGT
GTCTTCTGTGCCTGAGATTCTCTCTTCCATTTCTTGTATTCTAATAGTGA
TGCTATCATCTATGTGCTCCTGATCTCTATCCTAGGTTTTCTATCCCCAA
AGTTGTCTCCTTTTGTGATTTCTTTATTGTTTCTGCCTCTATTTTTATAT
CCTGTATGGTTTTGCTCAATTTCTTCACCTGCTTGGTTGTGTTTTCCTGT
AATTCTTTAAGGGATTTTTCTGTTTCCTCTTTAAGGGTGTCTATCTTTTT
CCTGGGTCCTCATGTATTTCTTTAAGGGAGTTATTTATTTCCTTCTTAAA
ATCCTCTGCCAGCATCATGAAATGTGATTTTAAATCCACATCTTGCTTTT
CCAGTGTGTTGGGCTATCCAGAGCTTGGGCTATCAAGACACCAACTTGCT
CTGGTGGGAGAACTGGGTTTTGATGATACCAATTGTCCGTGGTTTCTGTT
GGGAA

Query= MSMg01no481_i08.b1 MSMg01no481_i08.b1 CHROMAT_FILE:
MSMg01no481_i08.b1 PHD_FILE: MSMg01no481_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:11 2005
         (701 letters)



>mm_chr13_89729100_89730200
          Length = 1101

 Score = 1294 bits (669), Expect = 0.0
 Identities = 693/701 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaggtcaaaagatttgtcctttgttggagttttctcacacacattcagaaatctcctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggtcaaaagatttgtcctttgttggagttttctcacacacattcagaaatctcctca 260

                                                                       
Query: 61  catgactgaattcttgcactgtgtcctcacactgtatcatgagacacatgatccagtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgactgaattcttgcactgtgtcctcacactgtatcatgagacacatgatccagtgat 320

                                                                       
Query: 121 caggacaaaagttagccatctttgcctggtgtatagacacatgttggctaattggtttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggacaaaagttagccatctttgcctggtgtatagacacatgttggctaattggtttcc 380

                                                                       
Query: 181 ctggataatcagttattaaccaccacatgtacatactctgtgtggtatatcactttatgt 240
           ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 381 ctggataatcagttattaatcaccacaggtatatactctgtgtggtatatcactttatgt 440

                                                                       
Query: 241 tcaaagactgtcccatgatgtatattgaacaaaataagtcataccgaattcacctgacct 300
           ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaaactgtcccatgaggaatattgaacaaaataagtcataccgaattcacctgacct 500

                                                                       
Query: 301 tttctactcttcactcagaaggcacatagacatcctgagaaaaataaacccccaaagcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctactcttcactcagaaggcacatagacatcctgagaaaaataaacccccaaagcca 560

                                                                       
Query: 361 taaggtatcatgtatgaaatctattagagcaaggatcatttattgccatcaaatgtgtaa 420
           ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaggtatcgtgtatgaaatcttttagagcaaggatcatttattgccatcaaatgtgtaa 620

                                                                       
Query: 421 actgtgtgagcgggatgtggaagagagccttcagtgtatttttcaaagcatttgaatgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actgtgtgagcgggatgtggaagagagccttcagtgtatttttcaaagcatttgaatgtt 680

                                                                       
Query: 481 tccgatgaatgaggaatgatgtaaactgatactggaggagtaaactggaaagagactacc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccgatgaatgaggaatgatgtaaactgatactggaggagtaaactggaaagagactacc 740

                                                                       
Query: 541 atagtgtgttgtcatccaggcttgcattttacatttaaccactgcaagtgttaagtctga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atagtgtgttgtcatccaggcttgcattttacatttaaccactgcaagtgttaagtctga 800

                                                                       
Query: 601 agcaaagatatactctattaccactgtcttataaaagactatgtggataacacactacaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcaaagatatactctattaccactgtcttataaaagactatgtggataacacactacaa 860

                                                    
Query: 661 tgaatggcctacaagtcaatgtgaggtaatcctttaggagt 701
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgaatggcctacaagtcaatgtgaggtaatcctttaggagt 901


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space:   753881
Effective search space used:   753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)