XXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCATCCTGGAAG
CTACACCGTGGCTTTATGCTTAGAGGTTTTGTCTTCAGTTCCTATTTCTT
TGATAGATTAAAGTTACCAAGCTATAGCTGCATGGTAAAAGAATTTTACC
TGAAATCAGTGACCAAGTTCCTCTTGGGTCAATAAACAGAACTAAAAACC
TCTTCAAGAAATCAATGAACCAAGAATCAAAGTTGTAGTTGGACTCTAAT
AACTCTTGCCAGCTTGGTGTTTGCATGGGGGTGGCTCATAACCACTGCTC
CCTATGGCTCTCAATCAGCATGGGCCCAGGAGTTTATACCTGGGTCTTTG
TCTATACTTCCAAATAAACTTTCAGGAGCTATCTGCACCAGATGTTTGGT
GTGTTGCATTGCCAATAGATTCGAATATTTTTCATGACCTCATTTAATAT
TAATCCCCAAATCCCAAACAGCTATGTCTGGTGAGAAGACTCTCCTAGAC
ATTAAGGGTTTCTGTGTAGATAAGAAACACAGGCATTAGTGCAAATCTTA
TTAGTGGATGGCTATTCATTAGAAGGGAGAAAAGTTGAGGTATCTTAATA
GCTAAATGGTTAGGTAGATTGGCCAGTCACTGAATCATTTGCACATTCTC
TTCTATAGACAGTTGATTTCACTTAGGGATCATGCTGATGAACATAATCT
ATTGGCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCCCATTGATGTTGAAAGTTATTAAT
AACCAGTTATTGTTAATTCCTGTTATTTTTTATCTCTATGGTGAGTGTGT
GTGTTTCCGTTCCTTTGGTTTGCTGGTATGTTCTCTTGGGTGTAGTTAGC
CTCCTTAAATTGGAGTTTCCATCCTAGTATTTTCTGTAGGGATTTGTGGA
TAGATATTGTTTAAATTTTTTAATGGAATATCTTTTCTCCATCTATGGTT
ATTGACAGTTTTGCTGAGTGTCTGGGTTGACATTTTTGGTCTCTCAGAGT
TTGCAAGACATGTGCTTAGGCCCTTCTGGCTTTTAGAGTTTCTGTTGAGA
AATTTGATGTAAATCTGCTAGGTCTGCCTTTACATATTACTTGGCCTTTT
TCCCTTGCAGCATTTAATATTCTTTCTTTATTTTGTGCATTTAGTGTTTT
GATTATTATGTGGAAGAAGGGTTTTCTTTTCTGGTCCAATATGTTTGCTG
GTCTGTTAGCTTCTTCTATGTATATAGGCATTTCTTTCTTTGGGTAGGGA
CATTTTTTTTTCAACAATTTTGTTGAAAGGATTTTCTGATTTTTTAACCT
AGAAAACATCTCCTTCTATTCCTATTATTATTAGGTTTGGTCTTTTCATA
GTGTCCTAGATTTATTGAN

Query= MSMg01no482_f08.b1 MSMg01no482_f08.b1 CHROMAT_FILE:
MSMg01no482_f08.b1 PHD_FILE: MSMg01no482_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:13 2005
         (681 letters)



>mm_chr13_19726438_19727518
          Length = 1081

 Score = 1263 bits (653), Expect = 0.0
 Identities = 671/677 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttcatcctggaagctacaccgtggctttatgcttagaggttttgtcttcagtt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gaattccttcatcctggaagctacaccgtggctttatgcttagaggttttgtcttcagtt 822

                                                                       
Query: 65  cctatttctttgatagattaaagttaccaagctatagctgcatggtaaaagaattttacc 124
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 821 tctatttctttgatagattaaagttaccaagctatagctggatggtaaaagaattttacc 762

                                                                       
Query: 125 tgaaatcagtgaccaagttcctcttgggtcaataaacagaactaaaaacctcttcaagaa 184
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 761 tgaaatcagtgaccaagttcttcttggatcaataaacagaactaaaaacctcttcaagaa 702

                                                                       
Query: 185 atcaatgaaccaagaatcaaagttgtagttggactctaataactcttgccagcttggtgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atcaatgaaccaagaatcaaagttgtagttggactctaataactcttgccagcttggtgt 642

                                                                       
Query: 245 ttgcatgggggtggctcataaccactgctccctatggctctcaatcagcatgggcccagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttgcatgggggtggctcataaccactgctccctatggctctcaatcagcatgggcccagg 582

                                                                       
Query: 305 agtttatacctgggtctttgtctatacttccaaataaactttcaggagctatctgcacca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agtttatacctgggtctttgtctatacttccaaataaactttcaggagctatctgcacca 522

                                                                       
Query: 365 gatgtttggtgtgttgcattgccaatagattcgaatatttttcatgacctcatttaatat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gatgtttggtgtgttgcattgccaatagattcgaatatttttcatgacctcatttaatat 462

                                                                       
Query: 425 taatccccaaatcccaaacagctatgtctggtgagaagactctcctagacattaagggtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 taatccccaaatcccaaacagctatgtctggtgagaagactctcctagacattaagggtt 402

                                                                       
Query: 485 tctgtgtagataagaaacacaggcattagtgcaaatcttattagtggatggctattcatt 544
           ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 401 tctgtgtagataagagacacaggcattagtgcaaatcttatgagtggatggctattcatt 342

                                                                       
Query: 545 agaagggagaaaagttgaggtatcttaatagctaaatggttaggtagattggccagtcac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaagggagaaaagttgaggtatcttaatagctaaatggttaggtagattggccagtcac 282

                                                                       
Query: 605 tgaatcatttgcacattctcttctatagacagttgatttcacttagggatcatgctgatg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgaatcatttgcacattctcttctatagacagttgatttcacttagggatcatgctgatg 222

                            
Query: 665 aacataatctattggct 681
           |||||||||||||||||
Sbjct: 221 aacataatctattggct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space:   718641
Effective search space used:   718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)