ACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTACAAATTCCAAAGGAAGACTATTTTTCTTTAAATGTTCAGTCC
AAGCAATAATACAAAAAAATTTAAATGGCTTGAAGGCTTGAAGTGACATT
AAAAATCTACATACTTGCCTTAAATAAAGCATATTTTGAAACTCAACATA
TGAAAAACATAGTGAAAGATGTAACTTGAAGTGAGGTTAGGCTGTTTCTA
TTAAACCTGTTCTTTTCTTAATGATCAAGGGAACATTTCCTTTCACATAG
TTTTAATTTATAGTAACAAGTTATAAGGTTGTTCTCTAGACTGCATTGAA
TTCTCCTAATGAAATATCCCCTTGTCTGTTCAGCAGTGAGTTAAGGACTA
CTATAGACTTTTTTTCTACTGTTGAAAATGAACCTAAAATGAAAGACTTT
CTTTTCCCAATCATTGGGGCTTGTTTTAAAGGGAACCGGTATGTCTATGC
TTAGATGTTAATCAACCAACAATGTAATTTCCATTTATGCACAACTTGAC
TCCTCAGGCTTTTTTCCCTTTAATTGGAATGCCTTTAAAGAACACAATTG
ATGTAAATGAAAATAGATACATATAAATTTAAGAGGAAGACATTGGATGA
TTTTATAGGTTCATTTACAGCTTGTGCTTTGACTCCAGCAACTTATCTGC
CTTTTCTTTTCCTTTCTCTTAATTTTTCCCCAGATATGGGCTTATAGTTC
AAGGATAAAAATCACAAGCTTAATATGCACA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTAAGATTCCACCTCACACCAGTCTGAATGTCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
CGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTA
AACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCC
CTCCTTAGAAGTGGGAACAAAACACCCT

Query= MSMg01no484_f20.b1 MSMg01no484_f20.b1 CHROMAT_FILE:
MSMg01no484_f20.b1 PHD_FILE: MSMg01no484_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:54 2005
         (643 letters)



>mm_chr13_89099775_89100816
          Length = 1042

 Score = 1201 bits (621), Expect = 0.0
 Identities = 636/641 (99%), Gaps = 1/641 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaagactatttttctttaaatgttcagtccaagcaataatacaaaaaaatttaaatggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gaagactatttttctttaaatgttcagtccaagcaataatacaaaaaaatttaaatggct 781

                                                                       
Query: 61  tgaaggcttgaagtgacattaaaaatctacatacttgccttaaataaagcatattttgaa 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgaaggcttgaaatgacattaaaaatctacatacttgccttaaataaagcatattttgaa 721

                                                                       
Query: 121 actcaacatatgaaaaacatagtgaaagatgtaacttgaagtgaggttaggctgtttcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 actcaacatatgaaaaacatagtgaaagatgtaacttgaagtgaggttaggctgtttcta 661

                                                                       
Query: 181 ttaaacctgttcttttcttaatgatcaagggaacatttcctttcacatagttttaattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttaaacctgttcttttcttaatgatcaagggaacatttcctttcacatagttttaattta 601

                                                                       
Query: 241 tagtaacaagttataaggttgttctctagactgcattgaattctcctaatgaaatatccc 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tagtaacaagttataagattgttctctagactgcattgaattctcctaatgaaatatccc 541

                                                                       
Query: 301 cttgtctgttcagcagtgagttaaggactactatagactttttttctactgttgaaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttgtctgttcagcagtgagttaaggactactatagactttttttctactgttgaaaatg 481

                                                                       
Query: 361 aacctaaaatgaaagactttcttttcccaatcattggggcttgttttaaagggaaccggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aacctaaaatgaaagactttcttttcccaatcattggggcttgttttaaagggaaccggt 421

                                                                       
Query: 421 atgtctatgcttagatgttaatcaaccaacaatgtaatttccatttatgcacaacttgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgtctatgcttagatgttaatcaaccaacaatgtaatttccatttatgcacaacttgac 361

                                                                       
Query: 481 tcctcaggcttttttccctttaattggaatgcctttaaagaacacaattgatgtaaatga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcctcaggcttttttccctttaattggaatgcctttaaagaacacaattgatgtaaatga 301

                                                                       
Query: 541 aaatagatacatataaatttaagaggaagacattggatgattttataggttcatttacag 600
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 aaatagatacatataaatttaagaggaagacattggatgattttataggtccatttacag 241

                                                    
Query: 601 cttgtgctttgactccagcaacttatctgccttttcttttc 641
           || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 240 ct-gtgctttgactccagcatcttatctgccttttcttttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space:   653256
Effective search space used:   653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)