Query= MSMg01no485_a07.b1 MSMg01no485_a07.b1 CHROMAT_FILE:
MSMg01no485_a07.b1 PHD_FILE: MSMg01no485_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:48 2005
(448 letters)
>mm_chr13_67973037_67973884
Length = 848
Score = 563 bits (291), Expect = e-164
Identities = 306/317 (96%), Gaps = 11/317 (3%)
Strand = Plus / Minus
Query: 137 gttttgttttgttttgttttgttttgttttgtttttttgagacagggtttctctgtgtag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gttttgttttgttttgttttgttttgttttgtttttttgagacagggtttctctgtgtag 762
Query: 197 tcctggctgtcctggaactcactctgtagaccaggctggccttgaactcagaaatctgcc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tcctggctgtcctggaactcactctgtagaccaggctggccttgaactcagaaatctgcc 702
Query: 257 tgcctctgcctc-----tttttttgctgggattaaaggcgtgtgccaccacgcccggctt 311
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgcctctgcctcccaag------tgctgggattaaaggcgtgtgccaccacgcccggctt 648
Query: 312 tgttccagcccttgaacgtgcatcagctgtagggcagggctgatggtggtttgtagttca 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgttccagcccttgaacgtgcatcagctgtagggcagggctgatggtggtttgtagttca 588
Query: 372 ttctacctaatgtgaactatgggaactttgtaggtcattctacctaatgtgaacttcggt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttctacctaatgtgaactatgggaactttgtaggtcattctacctaatgtgaacttcggt 528
Query: 432 caacagtgtgcattcaa 448
|||||||||||||||||
Sbjct: 527 caacagtgtgcattcaa 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_a07.g1 MSMg01no485_a07.g1 CHROMAT_FILE:
MSMg01no485_a07.g1 PHD_FILE: MSMg01no485_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:48 2005
(653 letters)
>mm_chr13_67849716_67850768
Length = 1053
Score = 1263 bits (653), Expect = 0.0
Identities = 653/653 (100%)
Strand = Plus / Plus
Query: 1 tctggtggtaaataagatttacagaacagtaaaaagtcttgccacattccttgcatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggtggtaaataagatttacagaacagtaaaaagtcttgccacattccttgcatttgc 260
Query: 61 tgggtttcatgccagtatggattcgacgatgcttatacagatatgatgaacagctaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggtttcatgccagtatggattcgacgatgcttatacagatatgatgaacagctaaagg 320
Query: 121 cctgcccacagtcatcacacttatagagtttctctcccctatgaatctgttggtgttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgcccacagtcatcacacttatagagtttctctcccctatgaatctgttggtgttggt 380
Query: 181 gaaggctggaagaacagttaaaagctttgccacattctttacatttgtagggtttctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggctggaagaacagttaaaagctttgccacattctttacatttgtagggtttctccc 440
Query: 241 cagtatgagtttgctggtgcttagaaagaagaaagcgaacattaaaggccataccacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtatgagtttgctggtgcttagaaagaagaaagcgaacattaaaggccataccacatt 500
Query: 301 cttcacatttgtaaggtttctctccagtgtgaattctctgatggttagagagtgttgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcacatttgtaaggtttctctccagtgtgaattctctgatggttagagagtgttgtgc 560
Query: 361 caacactaaaggccttgccacattcttcacatttgtagggtttctctccagtatgtactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caacactaaaggccttgccacattcttcacatttgtagggtttctctccagtatgtactc 620
Query: 421 ttcggtgaacaataagtcctgaacaattagtaaaaggtttaccacattcttcacatttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcggtgaacaataagtcctgaacaattagtaaaaggtttaccacattcttcacatttgt 680
Query: 481 agcgtttctctccagtgtggattctttgatgcttacccagatatgaagaacagttaaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcgtttctctccagtgtggattctttgatgcttacccagatatgaagaacagttaaaag 740
Query: 541 ctttgccacacacttcacatttgtagggtttctcgccagtatgaattctttggtgctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttgccacacacttcacatttgtagggtttctcgccagtatgaattctttggtgctgtt 800
Query: 601 taaagctggaagaataattaaatgatttgccacattcttcacatttataggat 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 taaagctggaagaataattaaatgatttgccacattcttcacatttataggat 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
