TTTTTTAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXGCGCGGAATATCTATACCATCTCCCATAGCTAACTTCAGAACCACCTG
CCACAAGTACTCTGACCTTATTACAGAGGTGATAGACCTTTATCATAGTA
ACAAAATAACAGGAGAATCAACTTCAGAGGGGAAAATGGGGGCTGTGCAC
TTATGGGCCTAAAGGTTGTAGTTTGTGGTCACGCAGAACAGTTGCTTTGA
GTCTGAGCCAACAAGGCACGCTGTGACTGTGTGAGAGAATGCGGAAGAGG
AAGTCTGCTCACTTCACAGGAGTCAGGAAGAAGGAGAGGGCCAGCATCGC
AATATCCATTTGAGGGCCACAAACCCCGTGACTTAACTTCCTTTCACGTG
AGCCCAACCTCCCAATAGCTCAATCGCCTCCCAGTGTCACCACAAGCTAG
GGATCAAACTTTTCATAAATAAGTCTGGGGGATATTTAACATTTAAATCT
CAGCAATAAAAAAATAAAAATAAAAATAAAATGTAACCTATAATTCATCA
AAGTTTGTTTGTTTTGGAGACAGGCTTTCAAATAACCCAGGATGACCTTG
AACTTGTTGAAAAGCCAGATAGATAGATAGATAGATAGATAGATAGATAG
ATAGATAGATAGATAGATACATAGATAGATACATAGATACATAGATACTT
AGATAGATACATAGATAGATACATAG

GCGGGGTGCGGTGTGTGAGGTGGGCCCCGCGGCGGCCCTGCTTGCTTCTC
CCACAAAAGAGTGTTTTCCCTGTNCGTTTTTTTCCCCCAAAAAAACAACG
GAAGATGTAAGCATGCTATACCCACCGTTCGATGGTGAGTTTCGTGATTC
AGTTATCGCCGCTAAAAGAAGATATACTAGTAGCTTAGTACGTAATCTTA
TACCTCTATAATAAACTGACTACCACAGCTGCGTAAGAGATGATATTACC
AAGCGGTCGCGCGGTCGCTGTGAATTGTCCGTGTTGTGCGTTGCCCCCCG
GTATTGATGCAGCGCGACTTAAATCTTTCATCATCATTGTACCAGATATA
AAGATGTAGTTAGAGAGCTCCCGCGATCGAAGATCTTAGATAGCCGACAC
CACTCAATCTCACACATATACCACCTCTATAATTTCTTTCTCTATACTTC
CAGTCTTTCACCGGTCATCTCCGCATATGATTCTGCGGTCAGAATGAGCC
ACGTATGATTCCAGGTTGCGCTTATGCGATTTGACTAATTCTTTCCAATC
TATTATGATATCCCTTAGCCATCGTGTTGAAGACATCAAATATGTATCGT
CTAGCTTCTGCCGTCAGCGAGAAATCCACGTTGTATGCTCATCCTGTACA
TGCAAGCATGACGTTGCGTCGACAGCCGCGGAGATCGCGAGCACGCCATC
TCACACTGGGATGTTATGTTATGTCTATGATCGACCTACGATATAATCAT
CTAGACGACGCGGTCTAGACATGTATTTACATATTCAGACATCCGCGTAT
GTATTGATGTACGGCAGACTATGTTACGGATAGGTATGGACGAGTCGCGG
TCGTTATATCGCAGCGAGTTGGTTCTGTCTCGGTGTCGGCATGTGGTGCA
GCAGTATCCTCTATTCATTCAGGAAGTTATTAGCTTACAGAATTACATAT
CAGTATTGTCAGTGTGACAATGATACGCTGCGCCATCCCGCGCGCCACAC
GGTCGCCCGAGCACTAGATAGATTCGCGTCATATATTAGTGACTGAGCAC
CGTCGCAAGAGTGAAATAACCGTAAGTTCACTGCGCCGCCGCTGAGGACA
CGTGCACATGGCGTCTCTTGCTCATACTGAGTTACGCTCACAGCGCTCGC
GTGTCAGNACATCTNCTCTTACATATATATCTAACATTCATCCG

Query= MSMg01no485_m16.b1 MSMg01no485_m16.b1 CHROMAT_FILE:
MSMg01no485_m16.b1 PHD_FILE: MSMg01no485_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:52 2005
         (636 letters)



>mm_chr13_44577795_44578833
          Length = 1039

 Score = 1065 bits (551), Expect = 0.0
 Identities = 580/591 (98%), Gaps = 3/591 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagctaacttcagaaccacctgccacaagtactctgacctt---attacagaggtgata 57
           ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 201 atagctaacttcagaaccacctgccacaagtactctgaccttcttattacagaggtgata 260

                                                                       
Query: 58  gacctttatcatagtaacaaaataacaggagaatcaacttcagaggggaaaatgggggct 117
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctttatcataataacaaaataacaggagaatcaacttcagaggggaaaatgggggct 320

                                                                       
Query: 118 gtgcacttatgggcctaaaggttgtagtttgtggtcacgcagaacagttgctttgagtct 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcacttatgggcctaaaggttgtagtttgtggtcacgcagaacagttgctttgagtct 380

                                                                       
Query: 178 gagccaacaaggcacgctgtgactgtgtgagagaatgcggaagaggaagtctgctcactt 237
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagccaacaaggcacgttgtgactgtgtgagagaatgcggaagaggaagtctgctcactt 440

                                                                       
Query: 238 cacaggagtcaggaagaaggagagggccagcatcgcaatatccatttgagggccacaaac 297
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaggagtcaggacgaaggagagggccagcatcgcaatatccatttgagggccacaaac 500

                                                                       
Query: 298 cccgtgacttaacttcctttcacgtgagcccaacctcccaatagctcaatcgcctcccag 357
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccgtgacttaacttcctttcatgtgagcccaacctcccaatagctcaatcgcctcccag 560

                                                                       
Query: 358 tgtcaccacaagctagggatcaaacttttcataaataagtctgggggatatttaacattt 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcaccacaagctagggatcaaacttttcataaataagtctgggggatatttaacattt 620

                                                                       
Query: 418 aaatctcagcaataaaaaaataaaaataaaaataaaatgtaacctataattcatcaaagt 477
           |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 621 aaatctcagcaacaaaaaaataaaaataaaaataaaatttaacctataattcatcaaaat 680

                                                                       
Query: 478 ttgtttgttttggagacaggctttcaaataacccaggatgaccttgaacttgttgaaaag 537
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 ttgtttgttttggagacaggctttcaaataacccaggatgaccttgaactggttgaaaag 740

                                                              
Query: 538 ccagatagatagatagatagatagatagatagatagatagatagatagata 588
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccagatagatagatagatagatagatagatagatagatagatagatagata 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1039
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1029
Effective search space:   644154
Effective search space used:   644154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)