Query= MSMg01no486_c24.b1 MSMg01no486_c24.b1 CHROMAT_FILE:
MSMg01no486_c24.b1 PHD_FILE: MSMg01no486_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:25 2005
(566 letters)
>mm_chr13_21702051_21703015
Length = 965
Score = 658 bits (340), Expect = 0.0
Identities = 346/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 5 gaattctagccaaagtcagtgtgattcagccgtggctatcatgttgtaaataaatttcag 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 347 gaattctagccaaagtcagtgtgattcagccatggctatcatgttgtaaataaatttcag 288
Query: 65 cttcttaaggtaagcaattaagttattactctaacctttctattaattaacaaaaagaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 287 cttcttaaggtaagcaattaagttattactctaacctttctattaattaac-aaaagaat 229
Query: 125 aaatcccatgaaagcaaatgattaatagatataaaaataagcacatatttaaattttatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aaatcccatgaaagcaaatgattaatagatataaaaataagcacatatttaaattttatt 169
Query: 185 caagttagtcaatgaaggcagagatgcaatatttggtttcaaaagtcaaacatgcactaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 caagttagtcaatgaaggcagagatgcaatatttggtttcaaaagtcaaacatgcactaa 109
Query: 245 atttgtatagaataaagaaatgtccaaataaatgtgcaaatggaggcaaaactggcctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atttgtatagaataaagaaatgtccaaataaatgtgcaaatggaggcaaaactggcctct 49
Query: 305 actataaaacagaaaagacaattcaatctttctcagacgggaagcaag 352
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 actataaaacagaaaagacaattcaatctttctcagacgggaagcaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space: 530980
Effective search space used: 530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_c24.g1 MSMg01no486_c24.g1 CHROMAT_FILE:
MSMg01no486_c24.g1 PHD_FILE: MSMg01no486_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:25 2005
(609 letters)
>mm_chr13_21547131_21548140
Length = 1010
Score = 1094 bits (566), Expect = 0.0
Identities = 599/610 (98%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 1 cagggaatgtggttcgtcagactgtactggctgagaagagcagagtgtacaactagcaaa 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cagggaatgtgattcgtcagactgtactggctgagaagagcagagtatacaactagcaaa 260
Query: 61 atatcaagatttgcctgcaggtcttatataaatgcacgaatgagactggggcttctatat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 atatcaagatttgcctgcaggtcttatataaatgcacgtatgagactggggcttctatat 320
Query: 121 tagtagtattattggcaatacatgagtatattaccgataagtcctatttcagaaaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtagtattattggcaatacatgagtatattaccgataagtcctatttcagaaaataac 380
Query: 181 tcatagaattattcagatacaactcatagaattgtttcaagaatttgcatggtctttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatagaattattcagatacaactcatagaattgtttcaagaatttgcatggtctttatt 440
Query: 241 agatttttgttgtactgtcagaactatgtgcagtcctagatttgggaccctattctaagg 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 agatttttgttgtactgtcagaactatgtgcggtcctagatttgggaccctattctaagg 500
Query: 301 ccgttgaggatacagctccaatatctttttagttgttgctgcccacgcagatttgagttt 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 ccgttgaggatacagctccaatatctttctagttgttgctgcccacgcagatttgagttt 560
Query: 361 cagttgccttcgagtctggtggctagagaaagggtcctggtaccctgtttcctcctctgg 420
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttgcttttgagtctggtggctagagaaagggtcctggtaccctgtttcctcctctgg 620
Query: 421 ctttaccttctcaagcctggtgaagaagataggcagggtctgaatgcctgcc-agttagg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 ctttaccttctcaagcctggtgaagaagataggcagggtctgaatgcctgcccagttagg 680
Query: 480 taaaatgtaacagaaatggagcttatgaatcagctttcctttgtaggatcatcccagtaa 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 taaaatgtaacagaaatggagcttaggaatcagctttcctttgtaggatcatcccagtaa 740
Query: 540 gatggccctgtgtctttctaactcaggatatcaaaggtagaaaggggaatgtaggccaag 599
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 741 gatggccctgtgtctttctaactcaggatatcaaaggtagaaagaggagtgtaggccaag 800
Query: 600 taatacccca 609
||||||||||
Sbjct: 801 taatacccca 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space: 599000
Effective search space used: 599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
