Query= MSMg01no487_l17.b1 MSMg01no487_l17.b1 CHROMAT_FILE:
MSMg01no487_l17.b1 PHD_FILE: MSMg01no487_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:25 2005
(684 letters)
>mm_chr13_10758642_10759726
Length = 1085
Score = 1266 bits (655), Expect = 0.0
Identities = 673/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 3 ggaattctagaacatttactttccttagctatctgaactatctcttctgcctcccaaata 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctagaacagggagtttccttagctatctgaactatctcttctgcctcccaaata 262
Query: 63 tggtttgttgttgttctggcattaatgaaagacagaaaccttcaggaaaagcagtaattt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggtttgttgttgttctggcattaatgaaagacagaaaccttcaggaaaagcagtaattt 322
Query: 123 ccagactggagtaacagatggaaatccataccaaagacataataataagagtaagaataa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccagactggagtaacagatggaaatccataccaaagacataataataagagtaagaataa 382
Query: 183 gattggatcaaggaggtttaagagcagcctacctccccctaaaaaatcagacccttacaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gattggatcaaggaggtttaagagcagcctacctccccctaaaaaatcagacccttacaa 442
Query: 243 aggaaaggcaatttctgttgcaatgtcttgcttcttaccaacacaatggtggccagagct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggaaaggcaatttctgttgcaatgtcttgcttcttaccaacacaatggtggccagagct 502
Query: 303 ggcagaatcccatctttggatgattacaaaaatctgccattagcttagcctcttccatat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcagaatcccatctttggatgattacaaaaatctgccattagcttagcctcttccatat 562
Query: 363 ccagtgattatgtctttcataagtaaacattttagtagagtgtatttcttgaaaaatgat 422
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 563 ccagtgattatgtctttcataagtaaacattttagtagagcgtatttcttgaaaaatgat 622
Query: 423 ctctcccaaggaattttaaaagactgtttgaaatcagtttatcagaggaggagggcatgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctctcccaaggaattttaaaagactgtttgaaatcagtttatcagaggaggagggcatgg 682
Query: 483 agtgaaaggaacttgagtaaatgacatgtcacatggggaggaaatctaaacagagcagaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agtgaaaggaacttgagtaaatgacatgtcacatggggaggaaatctaaacagagcagaa 742
Query: 543 tgctttccatttctacaaaacattaatgaagtacaaatggaaagattaaagctcaatttt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgctttccatttctacaaaacattaatgaagtacaaatggaaagattaaagctcaatttt 802
Query: 603 tatctgtaacatgttcacatgtaaaagcttcactcgtgtcttaaatttggtgcatttgca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tatctgtaacatgttcacatgtaaaagcttcactcgtgtcttaaatttggtgcatttgca 862
Query: 663 aaaagaaaccaaa-caccc 680
||||||||||||| |||||
Sbjct: 863 aaaagaaaccaaaacaccc 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1085
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1075
Effective search space: 724550
Effective search space used: 724550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_l17.g1 MSMg01no487_l17.g1 CHROMAT_FILE:
MSMg01no487_l17.g1 PHD_FILE: MSMg01no487_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:26 2005
(652 letters)
>mm_chr13_10908219_10909270
Length = 1052
Score = 1207 bits (624), Expect = 0.0
Identities = 645/652 (98%)
Strand = Plus / Minus
Query: 1 attatgcagttcaggatgtcttcaattcagagtaaacctcctgtgtcttacccctgagtg 60
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 852 attatgcagttcagaatgtcttcaattcagagtaaacctcctgtctcttacccctgagtg 793
Query: 61 ctgaagctacagacatgtgtcatgatgcctgccttgtatgtcttttatttttattttgag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 792 ctgaagctacagacatgtgtcatgatgcctgctttgtatgtcttttatttttattttgag 733
Query: 121 agagaaatattgactcctttgatattttgttgaataacctctatgttatgctggagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agagaaatattgactcctttgatattttgttgaataacctctatgttatgctggagttgt 673
Query: 181 ttgtgacacatgtctgaacctcaaagacattccttgggccatgagtattatttttcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttgtgacacatgtctgaacctcaaagacattccttgggccatgagtattatttttcctgc 613
Query: 241 tcagctcccatggatgtcacctgcttggaactgtcaactgggctgactgccatccagtta 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 612 tcagctcccatggatgtcacctgctttgaactgtcaactgggctgactgccatccagtta 553
Query: 301 ccactcaaggtttaacctcaaccactgttgcttaacacgcatgtagagctgtactgagag 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 552 ccactcaaggtttaacctcaaccactgttgcttaacacgtatgtagagctgtactgagag 493
Query: 361 tcacaatatttatgggcaaggttctgaataatagacagaaaattcaaacctccaaatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcacaatatttatgggcaaggttctgaataatagacagaaaattcaaacctccaaatgct 433
Query: 421 ctactagctatccatagattagccagtttgtatgtgtaagtataccatcagccaaaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctactagctatccatagattagccagtttgtatgtgtaagtataccatcagccaaaacca 373
Query: 481 cagctttgccatatcctaggacagtagcaattactgaattgccttgtggcacaaagccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagctttgccatatcctaggacagtagcaattactgaattgccttgtggcacaaagccat 313
Query: 541 gagatacaggataaaaatatccttaaagcacgagttgcctttatgctgcatatttttccc 600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 312 gagatacaggataaaaatatccttaaagcacgagttgcctctatgctgcatatttttccc 253
Query: 601 tatggtggaatcccttgaggaatttctcactgagctgatcattggaaaagcc 652
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 252 tatggtggaatcccttgaggaatttctcactgagctgaacattggaaaagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
