Query= MSMg01no491_d17.b1 MSMg01no491_d17.b1 CHROMAT_FILE:
MSMg01no491_d17.b1 PHD_FILE: MSMg01no491_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:05 2005
(672 letters)
>mm_chr13_5916926_5917997
Length = 1072
Score = 1259 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Minus
Query: 1 caatttgatgcccaacatattcccaactctgacatcatcttccttgggaagttttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 caatttgatgcccaacatattcccaactctgacatcatcttccttgggaagttttctcct 808
Query: 61 cagtcactccacacctagtcactcccagctactttagctggcctatcaatttttgtaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 cagtcactccacacctagtcactcccagctactttagctggcctatcaatttttgtaatt 748
Query: 121 gttttgttcatttctaggcagtaagcaccatgaaaaagcaaatattatttacctctagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gttttgttcatttctaggcagtaagcaccatgaaaaagcaaatattatttacctctagat 688
Query: 181 tctcagctcttttagaacacatacatatagaaataaataatagatagactattacagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tctcagctcttttagaacacatacatatagaaataaataatagatagactattacagcag 628
Query: 241 atatagttattagtaaatatatttataaatacaggaaaacacaaatatagttgaatttta 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atatagttataagtaaatatatttataaatacaggaaaacacaaatatagttgaatttta 568
Query: 301 gaagttacagttgaacaaatgaatgagtataccttcaattgttgatacagttgagttatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaagttacagttgaacaaatgaatgagtataccttcaattgttgatacagttgagttatc 508
Query: 361 attatactctttattattctttctgtttcccctccccatgcgtgtacatgcatgcatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attatactctttattattctttctgtttcccctccccatgcgtgtacatgcatgcatgtc 448
Query: 421 tgtgtgtgtgtgtttgtatattaattgtaaaattgtcctggatttagaagtcctatctac 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtgtgtgtgtgtttgtgtattaattgtaaaattgtcctggatttagaagtcctatctac 388
Query: 481 actgttcttaatatagtatttagaaagcattaccccctttgaataataaaataaaggttt 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 actgttcttaatgtagtatttagaaagcattaccccctttgaataataaaataaaggttt 328
Query: 541 cccaaattacttgagctagctgccacagataatgaagcagatattgtctgttttcaaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cccaaattacttgagctagctgccacagataatgaagcagatattgtctgttttcaaatc 268
Query: 601 cctctccaaaagtacattaaactctttgggatgtgctctcagagcatcagggtagccaat 660
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 cctctccaaaagtacattaaactctttgggatgtgctctcggagcatcagggtagccaat 208
Query: 661 tagtgga 667
|||||||
Sbjct: 207 tagtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_d17.g1 MSMg01no491_d17.g1 CHROMAT_FILE:
MSMg01no491_d17.g1 PHD_FILE: MSMg01no491_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:05 2005
(670 letters)
>mm_chr13_5770559_5771628
Length = 1070
Score = 1234 bits (638), Expect = 0.0
Identities = 662/670 (98%)
Strand = Plus / Plus
Query: 1 agaaaatttgcatttaaacattatttcaacagagataatccaaggaggctgtattaacta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 agaaaatttgcatttaaacattatttcaacggagataatccaaggaggctgtattaacta 260
Query: 61 caaagggaaggagctacgtgtaagaaatcttccttataaaagacacactatttacatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagggaaggagctacgtgtaagaaatcttccttataaaagacacactatttacatttg 320
Query: 121 atctctgtataaaattatcagcatcattttgtatgtggttgagtgtacacatcttgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctctgtataaaattatcagcatcattttgtatgtggttgagtgtacacatcttgtctt 380
Query: 181 cttttgtttttttgaactaggatctcactatgtagccttagctgatgtggaactcagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttgtttttttgaactaggatctcactatgtagccttagctgatgtggaactcagaga 440
Query: 241 gaatctcctgtctctgcctcactagagctgggattaaaggcatgcaccaccaggcctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatctcctgtctctgcctcactagagctgggattaaaggcatgcaccaccaggcctgcc 500
Query: 301 tctctctgtttgtttgtcatgtgccatggacctctttaaaggaaggactaaggtttacag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 tctctctgtttgtttgtcatgtgccatggacctctttaaaggaaggactaagatttacag 560
Query: 361 caggtcctaatggacttatctttagaagatctttgagctagaccaagcaaactgattctt 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggtcttaatggacttatctttagaagatctttgagctagaccaagcaaactgattctt 620
Query: 421 gtagtcagattagatttctctgtgtaattaaacatagttcaaagtactgcttactccatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtagtcagattagatttctctgtgtaattaaacatagttcaaagtactgcttactccatg 680
Query: 481 tcacctgtcttccccattcactcttttgtttgagccctggtctattcctaagcctgaaaa 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacctgtcttcctcattcactcttttgtttgagccctggtctattcctaagcctgaaaa 740
Query: 541 ttacttgtcctttaaggctggttgaccaaagaaccccagagatccacctacttcctacct 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 741 ttacttgtcctttaaggctggttgaccaaagaaccccagagatccacctatttcccacct 800
Query: 601 caacctatgtggaaatacagatacattgggaacctgaattcaggtccttatgtttgcagg 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 801 caacctatgtggaaatacagatacattggggacctgaattcaggtccttatgtttgcagg 860
Query: 661 gcaagcgttt 670
||| ||||||
Sbjct: 861 gcaggcgttt 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
