AACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATGCGCG
GAATTCTCTCCATGTCCCTAGATTATGTGNCTGCAACACCCCCACAGGCC
TTAAAAAGGTTGACTTTGGCTATGGGACAGGAATCATTGCATCCATGTGG
AATTGGATGAAAGGGGAAGCTTCTAACAAAGAACTAAACATAAATTGTGG
GGGGTGTGGAGGGGGTAAAGCAGAATGTTGTAGATTAGAGTCTCGGCTGA
ATGCACTTTATATGTTATACCAAAACACTCAAGTCTGGGGTTGAAATGTT
TAGTTATCACTTCACTCAAGTTAAATAAACTCATGCCCATTGAGTTTGAT
GGTTGGATTAAATGCCAGGTACAGGAAAACACAGTTGTCTCCTCTACAAT
GTGAAGAAGTGTCCTTTGCTTTGCCATTCTCATCAGTTTGAACTAAATGA
GATTTTCCTTGGACCACAGACGTACTCCAAGTCGATTCAAATGTTAAACT
AAAATATACCTAGTACAGCTGGCTTTCCTTTTGACGGGCAAGAAAACATG
GCAAATACTATCAACCACATTTGTATTATTATTACTATCATCATTAGCAC
TATTACTATTATCATTTAGTAAGGACCTTGGAAGTTTAATTTTAATGAGG
GTATAGAAGAAAAGAATTTGAAGTTCATGATATCTACAAATAGATGTGAA
AATGAGCCCCTTAAAAGCAGAGGGATTGCA

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGTTCTTTAT
ATATATTGGATATTAGTCCCCTATCTGATTTAGGATGGGTAAAGATCCTT
TCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACGGTGTCTTTTTCCTT
ACAGAAACTTTGGAGTTTCATGAGGTCCCATTTGTCAATTCTCGATCTTA
CAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTCCCCCTGTGCCCATA
TCTTCAAGGCTTTTCCCCACTTTCTCCTCAATAAGTTTCAGTGTCTCTGG
TTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAATGTT
GGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTT
CTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGGTTCTCCACT
GCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCTGCAGC
CAATCAGGGAGTGACACGTTCCAGGCGAAGGATAATTCTCCTTAATAGGG
ACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTGCACTCTGGCTCCTGAA
GATGTAAGCAATAAAGCTTTGCCGCAGAAGATTC

Query= MSMg01no493_k16.b1 MSMg01no493_k16.b1 CHROMAT_FILE:
MSMg01no493_k16.b1 PHD_FILE: MSMg01no493_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:18 2005
         (619 letters)



>mm_chr13_119796678_119797693
          Length = 1016

 Score = 1158 bits (599), Expect = 0.0
 Identities = 613/619 (99%), Gaps = 3/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcaacacccccacaggccttaaaaaggttgactttggctatgggacaggaatcattgc 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ctgcaacacccccacaggccttaaaaaggttgactttggctgtgggacaggaatcattgc 260

                                                                       
Query: 61  atccatgtggaattggatgaaaggggaagcttctaacaaagaactaaacataaattgtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 261 atccatgtggaattggatgaaaggggaagcttctaacaaagaactaaacataaa---tgg 317

                                                                       
Query: 121 ggggtgtggagggggtaaagcagaatgttgtagattagagtctcggctgaatgcacttta 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggggggtggagggggtaaagcagaatgttgtagattagagtctcggctgaatgcacttta 377

                                                                       
Query: 181 tatgttataccaaaacactcaagtctggggttgaaatgtttagttatcacttcactcaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatgttataccaaaacactcaagtctggggttgaaatgtttagttatcacttcactcaag 437

                                                                       
Query: 241 ttaaataaactcatgcccattgagtttgatggttggattaaatgccaggtacaggaaaac 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttaaagaaactcatgcccattgagtttgatggttggattaaatgccaggtacaggaaaac 497

                                                                       
Query: 301 acagttgtctcctctacaatgtgaagaagtgtcctttgctttgccattctcatcagtttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acagttgtctcctctacaatgtgaagaagtgtcctttgctttgccattctcatcagtttg 557

                                                                       
Query: 361 aactaaatgagattttccttggaccacagacgtactccaagtcgattcaaatgttaaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aactaaatgagattttccttggaccacagacgtactccaagtcgattcaaatgttaaact 617

                                                                       
Query: 421 aaaatatacctagtacagctggctttccttttgacgggcaagaaaacatggcaaatacta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaaatatacctagtacagctggctttccttttgacgggcaagaaaacatggcaaatacta 677

                                                                       
Query: 481 tcaaccacatttgtattattattactatcatcattagcactattactattatcatttagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tcaaccacatttgtattattattactatcatcattagcactattactattatcatttagt 737

                                                                       
Query: 541 aaggaccttggaagtttaattttaatgagggtatagaagaaaagaatttgaagttcatga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aaggaccttggaagtttaattttaatgagggtatagaagaaaagaatttgaagttcatga 797

                              
Query: 601 tatctacaaatagatgtga 619
           |||||||||||||||||||
Sbjct: 798 tatctacaaatagatgtga 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1016
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1006
Effective search space:   612654
Effective search space used:   612654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)