Query= MSMg01no494_g21.b1 MSMg01no494_g21.b1 CHROMAT_FILE:
MSMg01no494_g21.b1 PHD_FILE: MSMg01no494_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:16 2005
(608 letters)
>mm_chr13_22330805_22331812
Length = 1008
Score = 1145 bits (592), Expect = 0.0
Identities = 604/612 (98%), Gaps = 8/612 (1%)
Strand = Plus / Plus
Query: 1 tgggttttaaaccagcaatatcagtgcttagcttttagagttattttcgttcatctcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggttttaaaccagcaatatcagtgcttagcttttagagttattttcgttcatctcaaa 260
Query: 61 agtataagaaacaaacttagattttacaatttctaaagaaaatatcttcagacaaaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtataagaaacaaacttagattttacaatttctaaagaaaatatcttcagacaaaatgg 320
Query: 121 agagtaaatcatacctttggtcaaccatgtaatttttaaaaatttatttacatttatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtaaatcatacctttggtcaaccatgtaatttttaaaaatttatttacatttatcct 380
Query: 181 tgaaagtgtcattggataacttaacctcactgtgtctggattttctcaaacaaattgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaagtgtcattggataacttaacctcactgtgtctggattttctcaaacaaattgggt 440
Query: 241 atgaaaacatttt----aatagatgcatgtttcacacactttgggtatcaagagaccttc 296
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaaaca----gcaaaatagatgcatgtttcacacactttgggtatcaagagaccttc 496
Query: 297 tatggaacaaggataactttctttgaagacaggagcatcttttaaaggggaagccatgtg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tatggaacaaggataactttctttgaagacaggagcatcttttaaaggggaagccatgtg 556
Query: 357 gtcctggaacaaattagctctttaagcagtcataaggcatactctggattggaatgtgcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtcctggaacaaattagctctttaagcagtcataaggcatactctggattggaatgtgcc 616
Query: 417 taggtacagttacattgtgttctgcttggtatatgctcagaagcagaatattcactgttg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 taggtacagttacattgtgttctgcttggtatatgctcagaagcagaatattcactgttg 676
Query: 477 ttatatccccagatagaaggaaggacttgaaaaatgaaagtgtggcttactctgttgagt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttatatccccagatagaaggaaggacttgaaaaatgaaagtgtggcttactctgttgagt 736
Query: 537 aagtatatctttgatgtgctgctttgtaattttggaaaggttaacagatagccagagaca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aagtatatctttgatgtgctgctttgtaattttggaaaggttaacagatagccagagaca 796
Query: 597 tgaggaccatta 608
||||||||||||
Sbjct: 797 tgaggaccatta 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_g21.g1 MSMg01no494_g21.g1 CHROMAT_FILE:
MSMg01no494_g21.g1 PHD_FILE: MSMg01no494_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:16 2005
(626 letters)
>mm_chr13_22483198_22484223
Length = 1026
Score = 1185 bits (613), Expect = 0.0
Identities = 622/625 (99%)
Strand = Plus / Minus
Query: 1 atttctttggagattttcaactgttaaccctggagaacatgagggaaggagtgtggcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 atttctttggagattttcaactgttaaccctggagaacatgagggaaggagtgtggcctt 766
Query: 61 ggctctcatgacaggttcagtttggtactccttcagtgtctgttgagatgtttcttcatc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 765 ggctctcatgacaggttcagtttggcactccttcagtgtctgttgagatgtttcttcgtc 706
Query: 121 tctgatatgcaggtgcctttgttctaaatcagtccaactgaatctaggacttagacctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tctgatatgcaggtgcctttgttctaaatcagtccaactgaatctaggacttagacctca 646
Query: 181 gcaggatgttattgttcatgttgtggagctccattctcatatctcagatatttttagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcaggatgttattgttcatgttgtggagctccattctcatatctcagatatttttagtaa 586
Query: 241 gctttgggtaccatttctagaatgaaaggaatctagcttcagtagctccacaggtttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gctttgggtaccatttctagaatgaaaggaatctagcttcagtagctccacaggtttgtg 526
Query: 301 tgttgtgaggacttggaatgcatctgttccctgctttctttcctgaagaaacttctaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgttgtgaggacttggaatgcatctgttccctgctttctttcctgaagaaacttctaaca 466
Query: 361 agtgattaatttctactgaaatcgactatcagaagatagagaggtggctcatctcttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agtgattaatttctactgaaatcgactatcagaagatagagaggtggctcatctcttcca 406
Query: 421 ttatttgggaatgctaaaggaaattaatttaaaagacaggatggacttctgtttagatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttatttgggaatgctaaaggaaattaatttaaaagacaggatggacttctgtttagatag 346
Query: 481 atggatgttcccatgatggattaaagctctaagaccctggggtagattatatccattcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atggatgttcccatgatggattaaagctctaagaccctggggtagattatatccattcat 286
Query: 541 cctgatttttttaaaagcaagccagcaaacaatcaaacaaaacaaaaaagattgtggctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cctgatttttttaaaagcaagccagcaaacaatcaaacaaaacaaaaaagattgtggctc 226
Query: 601 tttgttgcttatcactgggataaag 625
||||||||||| |||||||||||||
Sbjct: 225 tttgttgcttagcactgggataaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
