Query= MSMg01no495_f01.b1 MSMg01no495_f01.b1 CHROMAT_FILE:
MSMg01no495_f01.b1 PHD_FILE: MSMg01no495_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:22 2005
(425 letters)
>mm_chr13_47553093_47553917
Length = 825
Score = 605 bits (313), Expect = e-177
Identities = 362/407 (88%), Gaps = 44/407 (10%)
Strand = Plus / Minus
Query: 60 aatcaattttcacatttaatcttgatcctctttggttccagctgtaccatgcctgcctga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 aatcaattttcacatttaatcttgatcctctttggttccagctgtaccatgcctgcctga 766
Query: 120 cactgccatgttcctgccttaatgataatggactgaacctctgaacctgtaagccagccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 cactgccatgttcctgccttaatgataatggactgaacctctgaacctgtaagccagccc 706
Query: 180 cagttaaatgttgtcctttataagagttgccttggt------------------------ 215
||||||||||||||||||||||||||||||||||||
Sbjct: 705 cagttaaatgttgtcctttataagagttgccttggtcatggtgtctgttcacagcagtaa 646
Query: 216 --------------------catacttcatgtctacctgtctcccatttcctcctctggt 255
||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaccctaactaagaccaaaccatacttcatgtctacctgtctcccatttcctcctctggt 586
Query: 256 ctatgagaatatcatcaacacctttgctgcatgaggtttcttttctgcgcatagtaaact 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctatgagaatatcatcaacacctttgctgcatgaggtttcttttctgcgcatagtaaact 526
Query: 316 ctacccacggccaccaactaaagttgtagcccctctattgtatttccccaaaggggagaa 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctacccacggccaccaactaaagttgtagcccctctattgtatttccccaaaggggagaa 466
Query: 376 agggagaaatgatggaggggagaaggagagagaggaagggatatgat 422
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 465 agggagaaaggatggaggggagaaggagagagaggaagggatatgat 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_f01.g1 MSMg01no495_f01.g1 CHROMAT_FILE:
MSMg01no495_f01.g1 PHD_FILE: MSMg01no495_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:22 2005
(519 letters)
>mm_chr13_47414100_47415018
Length = 919
Score = 980 bits (507), Expect = 0.0
Identities = 516/519 (99%)
Strand = Plus / Plus
Query: 1 ttcccggtggctttgaggatgttaattaacacaacccaacccaactctacccttcacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccggtggctttgaggatgttaattaacacaacccaacccaactctacccttcacctt 260
Query: 61 ttctggataattcctgattatggaatgttacctgtgtgcctgcagtgccccattgtgaat 120
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 261 ttctggataattcctgattatggaatgctacctgtgtgcctgcagcgccccattgtgaat 320
Query: 121 tcttacagcaatgttatggagtctgggttacagggtctctagtcctatccttactttgca 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcacagcaatgttatggagtctgggttacagggtctctagtcctatccttactttgca 380
Query: 181 gacgtgggagcgggggctcagcgctgacctactttctgagacgtgggtcaggctgaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacgtgggagcgggggctcagcgctgacctactttctgagacgtgggtcaggctgaggca 440
Query: 241 gaaccaggcttgagtccaggcctggcctgaaaatgtactctggtttttattcattacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaccaggcttgagtccaggcctggcctgaaaatgtactctggtttttattcattacctt 500
Query: 301 gtattttcatcattctctagaagccagggaccccacaatggaaatcggatgtttccccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtattttcatcattctctagaagccagggaccccacaatggaaatcggatgtttccccct 560
Query: 361 tattttgaagcatgttcctggtggctgttctctgtgcagacgataaaagacaagcatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattttgaagcatgttcctggtggctgttctctgtgcagacgataaaagacaagcatcat 620
Query: 421 gtcctttgctggagtggaaaagatgtgcttatctctgggaaaagcagaggaggggaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcctttgctggagtggaaaagatgtgcttatctctgggaaaagcagaggaggggaggaa 680
Query: 481 gaaggagctatctccctgcaagaaaagcaacttttcaga 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaggagctatctccctgcaagaaaagcaacttttcaga 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
