MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-495L10
Chromosome	13 (Build37)
Map Location	40,519,334 - 40,519,909
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041779, LOC382747, A230103O09Rik, Ofcc1
Downstream gene	LOC666894, LOC100039048, Tcfap2a, EG621629, EG637157, LOC100039105, Gcnt2, Pak1ip1, Tmem14c, Mak, EG621771, Gcm2, LOC637277, Elovl2, LOC268650, BC024659, Nedd9
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041779 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC382747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	A230103O09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77753 MGI:1925003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Ofcc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218165 MGI:2658851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC666894 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100039048 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Tcfap2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21418 MGI:104671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621629 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621629 MGI:3646756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 8 Proteins

name	EG637157 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637157 MGI:3647123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100039105 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039105
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Gcnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14538 MGI:1100870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Pak1ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68083 MGI:1915333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem14c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66154 MGI:1913404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mak (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17152 MGI:96913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621771 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621771 MGI:3648602
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Gcm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107889 MGI:1861438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC637277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:637277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	Elovl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54326 MGI:1858960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC268650 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:268650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	BC024659 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108934 MGI:2652854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 121 ESTs

name	Nedd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18003 MGI:97302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041779 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263948 GeneID:100041779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100041779 transcript_id : XM_001476997.1

name	A230103O09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264179 GeneID:77753 MGI:1925003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA A230103O09 gene transcript_id : XM_001471948.1

name	Ofcc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264181 GeneID:218165 MGI:2658851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : orofacial cleft 1 candidate 1 transcript_id : XM_001471988.1

name	LOC100039048 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264184 GeneID:100039048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001472162.1

name	Tcfap2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981461 GeneID:21418 MGI:104671
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2, alpha transcript_id : NM_011547.2

name	EG621629 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264183 GeneID:621629 MGI:3646756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 8 Proteins product : predicted gene, EG621629 transcript_id : XM_886036.3

name	Gcnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39995101 GeneID:14538 MGI:1100870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosaminyl (N-acetyl) transferase 2, I-branching enzyme transcript_id : NM_023887.3

name	Gcnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39995099 GeneID:14538 MGI:1100870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosaminyl (N-acetyl) transferase 2, I-branching enzyme transcript_id : NM_008105.2

name	Gcnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39995103 GeneID:14538 MGI:1100870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosaminyl (N-acetyl) transferase 2, I-branching enzyme transcript_id : NM_133219.1

name	Pak1ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046258 GeneID:68083 MGI:1915333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAK1 interacting protein 1 transcript_id : NM_026550.2

name	Tmem14c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803169 GeneID:66154 MGI:1913404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 14C transcript_id : NM_025387.2

name	Mak (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678785 GeneID:17152 MGI:96913
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : male germ cell-associated kinase transcript_id : NM_008547.1

name	EG621771 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82950518 GeneID:621771 MGI:3648602
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG621771 transcript_id : XM_896627.1

name	Gcm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680508 GeneID:107889 MGI:1861438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glial cells missing homolog 2 (Drosophila) transcript_id : NM_008104.2

name	LOC637277 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264186 GeneID:637277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : similar to 145 kDa nucleolar protein transcript_id : XM_001472337.1

name	Elovl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507146 GeneID:54326 MGI:1858960
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 transcript_id : NM_019423.1

name	BC024659 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264188 GeneID:108934 MGI:2652854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 121 ESTs product : cDNA sequence BC024659 transcript_id : XM_001472442.1

name	Nedd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802926 GeneID:18003 MGI:97302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural precursor cell expressed, developmentally down-regulated gene 9 transcript_id : NM_017464.3

name	LOC100041779 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263949 GeneID:100041779
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477047.1

name	A230103O09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264180 GeneID:77753 MGI:1925003
definition	codon_start : 1 product : hypothetical protein LOC77753 protein_id : XP_001471998.1

name	Ofcc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264182 GeneID:218165 MGI:2658851
definition	codon_start : 1 product : orofacial cleft 1 candidate 1 protein_id : XP_001472038.1

name	LOC100039048 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264185 GeneID:100039048
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472212.1

name	Tcfap2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981462 CCDS:CCDS26467.1 GeneID:21418 MGI:104671
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Ap-2 (a); AP-2 alpha product : transcription factor AP-2, alpha protein_id : NP_035677.2

name	EG621629 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950513 GeneID:621629 MGI:3646756
definition	codon_start : 1 product : similar to Ubxd4 protein protein_id : XP_891129.1

name	Gcnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39995102 GeneID:14538 MGI:1100870
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IDA]; GO:0008109 - N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 2; beta-1,6-N-acetylglucosaminyltransferase; glucosaminyltransferase, I-branching enzyme product : glucosaminyl (N-acetyl) transferase 2 isoform B protein_id : NP_076376.3

name	Gcnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39995100 CCDS:CCDS26468.1 GeneID:14538 MGI:1100870
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IDA]; GO:0008109 - N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1; beta-1,6-N-acetylglucosaminyltransferase; glucosaminyltransferase, I-branching enzyme product : glucosaminyl (N-acetyl) transferase 2 isoform A protein_id : NP_032131.2

name	Gcnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39995104 CCDS:CCDS26469.1 GeneID:14538 MGI:1100870
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IDA]; GO:0008109 - N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : isoform C is encoded by transcript variant 3; beta-1,6-N-acetylglucosaminyltransferase; glucosaminyltransferase, I-branching enzyme product : glucosaminyl (N-acetyl) transferase 2 isoform C protein_id : NP_573482.1

name	Pak1ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046259 GeneID:68083 MGI:1915333
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 note : p21-activated protein kinase-interacting protein 1; glycerophosphodiester phosphodiesterase domain containing 1 product : PAK/PLC-interacting protein 1 protein_id : NP_080826.2

name	Tmem14c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384766 CCDS:CCDS26470.1 GeneID:66154 MGI:1913404
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 product : transmembrane protein 14C protein_id : NP_079663.1

name	Mak (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678786 CCDS:CCDS26471.1 GeneID:17152 MGI:96913
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : male germ cell-associated kinase protein_id : NP_032573.1

name	EG621771 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950519 GeneID:621771 MGI:3648602
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901720.1

name	Gcm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680509 CCDS:CCDS26472.1 GeneID:107889 MGI:1861438
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : glial cells missing homolog 2 protein_id : NP_032130.2

name	LOC637277 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264187 GeneID:637277
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472387.1

name	Elovl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507147 GeneID:54326 MGI:1858960
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0016747 - transferase activity, transferring groups other than amino-acyl groups [Evidence IDA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0000038 - very-long-chain fatty acid metabolism [Evidence IDA] codon_start : 1 function : putatively involved in fatty acid elongation note : sequence similarity to Cig30 2 product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 protein_id : NP_062296.1

name	BC024659 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264189 GeneID:108934 MGI:2652854
definition	codon_start : 1 product : hypothetical protein LOC108934 protein_id : XP_001472492.1

name	Nedd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543318 GeneID:18003 MGI:97302
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 product : neural precursor cell expressed, developmentally down-regulated gene 9 protein_id : NP_059492.2

name	LOC382747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382747
definition	number : 1 pseudo : _no_value

name	LOC382747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382747
definition	number : 2 pseudo : _no_value

name	LOC666894 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666894
definition	number : 1 pseudo : _no_value

name	EG637157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637157
definition	number : 5 pseudo : _no_value

name	EG637157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637157
definition	number : 4 pseudo : _no_value

name	EG637157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637157
definition	number : 3 pseudo : _no_value

name	EG637157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637157
definition	number : 2 pseudo : _no_value

name	EG637157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637157
definition	number : 1 pseudo : _no_value

name	LOC100039105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039105
definition	number : 1 pseudo : _no_value

name	LOC100039105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039105
definition	number : 2 pseudo : _no_value

name	LOC100039105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039105
definition	number : 3 pseudo : _no_value

name	LOC100039105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039105
definition	number : 4 pseudo : _no_value

name	LOC100039105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039105
definition	number : 5 pseudo : _no_value

name	LOC268650 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:268650
definition	number : 1 pseudo : _no_value

clone name	MSMg01-460K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-052O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262N24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-495L10.T7 (MSMg01no495_l10.b1)	MSMg01-495L10.TJ (MSMg01no495_l10.g1)
ACC	AG572692	AG572693
length	1,126	750
length of high quality (start - end)	---	570 (82 - 651)
definition	CHROMAT_FILE: MSMg01no495_l10.b1 PHD_FILE: MSMg01no495_l10.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:20:50 2005	CHROMAT_FILE: MSMg01no495_l10.g1 PHD_FILE: MSMg01no495_l10.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:20:50 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTGCACAAAATACCATAACCATAACCTGGGGGCACACCCCTTTTCTCATA CCGGGGAGCGGGGGATGCGTTCTGATTTTCTCTTGACCGAATGTGACATG GTACCGAAGTGCTAACCCCATAACCTCTAACTCTTTCTCTGCCTTTATTA CTCATAATTCCCTATGCTGATAATCACTTTATGCACTTATTCCGCGGGCC TCGAGGCGCAGGGAGCGTAGATCACACAGTCTCTCGTCTTAGTTGAAATT TGCCACTATATACGCCAACGAGGCACCAGCTACCACTCACGGGCGCCTGA GCCGAGGTATAGCAGTTGTGTCTGCCGCCATCCCGATGGGGAGCAGGTTG GAGGTTCTCTAAGAATCTTGCGCATATGCATTCTTCCATCCTTTCCGCAA CCGCGTAATCGCTGGGGTCGCGTATCTGTATATGGGGAGTGAGGTGAGGT CGTATCGTCTACAAACCGTGTTCGGTGACAAGAGACACCGCGTATTATCT ACCCCGCCCCGCTCTTTTCCATGCTACAGTCTCAAGGCGGTCGTTCATGT GCACGATTATGTAGCACCACAAAATTGGTACCGCCCGATAAAAAACTCCC CGTCGCGTTCTCCTCCCGTCGGCAGGTGCGTGTGTATCTTAGGTGGACGT AGACGCCGCTACACATTTTCCCGCGGTCAAAAAACAACACACACGACGTA TACGCCACACGCCGGTTAGCTAAAGATAACGTGACAATAATGCGTGACAC GTCATATTGAGTGCAGAGTTTGTGTGATACACGGGCGGCACGCGGAGTTC ATAAATCCGTGCGGTTGTCTAACTTTGAACACGAAGAGCCAGCGACCGGC CTCGGTCTCGCCTCCCGCCGCTTCACGCTGATAAAAGTACTCTCTCGCTA CTCGCTGCATTACCATTCTCGTGCGTCCCGTCTCATATGTATGACGCGAA TCGGCGAGCGAGGATGATAGTGAGCCGTGACACACGCACAACCAATCAAT TCTCCCCCGCGCTGGTCTTAATATCTCTATTTCATCATGAAGATATGGTC GCGGGTGGATACTTGTAATACTGAGTGGTGTCACGCCGTGTGCTAAGCCA TAACACAACCTATTAGTCATTACACC	NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACATTCCGTTCCAAAGGA GCTAGAAACAGACTGTCTTTTCCATACTGGGTGGAGACTGAGCATAGGAG GAAACTTCCAAAGCCCCACTCCCAACAGTGACACACTTCCTCCAATGAGG CCACATCTCCTAATAGTACTACTTCTCATGGGTCAAGCTTGGTCAAAACC CACCACAGGTATGTTCATTGTCTAAACTCCAAGACTAACTGTATTCAATT AAGGAAGTGGAATTAAAATGGAAAGTTCTTAGACTTGGTATATCTGTGCT TAAATATGTGTATCCTATTTGAATGACATGATCTTGATTCAATAAAAGGG TGTGTAAAAGTACAAGATTCTTGCCTCCACAGAGTTGAGGATCCAATGCA GAAGACACAGTCATCAAATTTGCATACACACACACACACACACAGTGAGT TTCAGATGGTATGATCTGAGAATATAGCACAGGAAGAACAATATGGGGGC TGAAGAGACTTGGTCAAGATGAGGACCATCTTGACATGAGTTCTCTTCTC AAAGGTCAGTAGAAGTCAGCTAGGAAAGTAGTTAAACCAAGGGAGAAGCT CAGAGCCTAATGAATAGTGACAATGAACACTGGGGACAAAGTAGCTATGA AAGGTAAGCCGATGGGGTCATTGGGCTGATGTAACATGACAAACAATAAG
quality values	Open. Hide. 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 8 8 6 6 8 8 8 8 9 9 10 10 8 8 8 6 6 8 8 12 9 9 10 8 8 8 8 8 8 8 8 8 11 12 15 13 10 10 8 8 8 12 12 12 8 8 8 8 8 12 8 8 8 8 8 8 8 8 7 10 7 7 8 8 12 11 8 8 8 8 8 8 9 8 8 8 6 6 6 7 9 10 10 10 9 9 9 9 8 8 8 6 6 6 10 12 12 10 8 8 8 8 8 10 11 10 8 8 6 6 8 8 9 10 10 8 8 8 8 6 6 8 8 8 8 8 8 9 8 8 10 8 8 8 8 8 11 7 7 8 8 10 10 8 8 8 8 8 8 6 6 6 6 8 8 8 7 7 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 10 8 10 8 8 8 8 8 8 8 8 8 11 11 11 11 12 9 8 8 6 6 8 8 8 8 6 6 8 8 10 10 8 8 8 10 10 10 8 6 6 6 6 8 8 8 8 8 12 10 10 10 10 8 8 8 8 6 8 8 8 8 7 7 10 7 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 7 7 11 11 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 10 11 11 11 11 10 10 9 9 8 7 7 8 8 8 8 8 8 6 6 8 8 11 10 10 8 8 8 8 6 6 10 7 8 8 8 10 10 10 10 9 9 10 8 17 10 10 9 11 12 12 10 10 8 8 6 6 8 8 10 8 8 8 8 8 8 8 6 6 8 8 8 9 9 9 12 10 8 8 8 6 6 8 8 8 8 8 8 10 8 8 8 9 9 9 8 8 8 8 8 8 6 6 8 8 10 12 12 13 8 8 8 8 8 8 8 6 6 6 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 11 11 10 8 8 8 11 11 9 9 9 9 10 10 8 6 6 8 6 10 11 10 8 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 9 11 16 11 11 12 21 21 13 11 8 8 8 8 8 8 8 12 14 14 9 9 9 10 10 10 11 8 8 6 6 8 8 8 10 8 8 6 6 8 8 15 13 11 10 10 10 10 11 9 9 9 8 8 6 6 6 6 8 6 6 6 6 8 8 8 9 9 10 10 10 10 12 12 12 14 8 11 8 8 8 8 10 13 10 10 10 10 10 8 8 6 6 8 8 17 22 19 12 12 11 8 8 10 8 8 6 7 7 8 8 9 9 9 9 9 9 11 10 13 9 9 10 8 8 10 10 10 8 9 9 9 9 8 8 8 8 8 8 11 8 8 8 6 8 6 6 8 6 9 9 8 8 8 8 8 8 8 10 11 11 9 8 8 8 7 6 8 8 10 11 13 8 8 10 12 8 8 8 8 8 9 9 13 14 15 13 8 8 6 6 6 8 10 12 19 9 10 8 8 11 13 11 11 10 12 8 8 8 10 6 6 8 6 6 8 10 8 8 8 8 8 8 8 8 8 10 8 6 6 8 8 8 8 8 8 8 9 9 9 10 8 8 8 8 8 6 9 8 8 8 8 8 8 8 12 11 9 8 8 8 9 9 9 8 8 8 8 6 6 8 8 7 7 7 7 10 8 8 8 8 9 8 8 8 10 12 10 9 12 9 9 9 10 10 9 9 10 10 8 8 6 6 8 8 8 8 8 8 8 6 6 6 6 6 8 6 8 8 8 9 9 12 8 8 8 8 10 12 9 6 6 6 8 8 6 6 13 15 12 8 8 8 8 8 8 10 8 8 6 6 6 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 10 8 8 10 8 8 8 9 12 11 10 9 9 8 6 6 6 6 6 8 10 8 8 8 8 10 10 10 10 9 8 8 10 10 8 8 8 8 8 8 10 8 8 8 8 8 8 9 6 8 8 8 8 12 10 8 8 8 8 8 6 6 6 6 8 8 8 8 10 10 11 10 15 16 9 8 8 6 6 8 6 11 11 11 11 11 11 14 8 8 8 8 10 8 8 8 8 8 8 13 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 6 8 7 7 8 8 13 16 15 12 12 12 15 8 8 6 6 8 8 15 12 12 12 8 8 6 6 6 6 8 8 8 8 10 8 8 8 8 8 10 10 9 7 8 6 6 6 10 8 8 9 9 12 12 15 14 14 14 11 10 8 12 8 10 6 6 6 10 6 6 8 6 6 6 8 10 10 10 9 12 12 8 8 8 8 10 11 11 11 11 6 6 6 6 8 8 8 6 6 6 6 6 8 8 8 8 9 9 7 7 8 8 7 6 8 6 6 6 8 8 8 10 10 8 8 9 9 9 9 9 9 8 8 8 8 8 8 8 9 8 6 6 6	Open. Hide. 0 0 3 7 6 6 6 6 13 10 9 9 9 9 15 3 0 3 23 18 31 31 31 36 27 27 3 0 3 23 18 29 34 18 16 9 9 6 7 7 7 7 8 10 12 12 12 13 11 12 11 12 27 26 44 41 41 41 39 37 59 34 29 8 8 6 6 6 6 8 10 13 18 24 23 18 19 29 33 33 33 37 39 47 47 47 53 59 59 57 57 32 32 24 36 36 42 44 68 57 57 57 59 59 59 59 51 42 47 47 47 50 57 57 57 54 54 57 44 59 37 37 30 37 37 57 59 59 59 59 59 68 68 68 57 57 57 57 57 57 57 40 40 46 57 57 57 68 68 68 68 57 57 57 57 57 43 43 35 37 43 43 47 42 42 43 42 43 50 43 43 43 37 37 52 43 52 52 52 52 57 52 52 52 52 43 50 43 52 52 43 43 35 42 43 57 57 57 57 57 52 52 52 57 57 57 57 57 52 52 52 59 59 59 68 59 59 57 59 59 57 57 57 52 52 52 52 52 57 57 59 57 52 52 57 57 57 59 59 59 59 44 35 35 43 44 62 62 52 52 43 43 39 39 39 43 43 43 44 62 62 68 62 62 52 52 52 62 62 62 52 52 62 62 62 62 62 47 43 35 35 44 44 62 68 62 62 62 62 62 62 62 59 44 43 39 39 43 44 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 59 44 39 27 14 14 23 23 23 29 23 39 39 62 52 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 59 59 43 43 52 52 62 62 68 68 68 68 68 62 62 62 52 52 62 62 62 52 52 52 62 62 62 44 43 31 31 43 44 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 43 43 43 62 62 59 59 43 52 52 62 62 43 43 43 43 35 35 43 39 62 62 62 68 68 68 68 68 62 44 43 43 35 35 43 44 44 62 52 52 62 62 62 43 44 43 43 43 43 31 31 35 39 43 43 62 62 68 59 59 52 52 43 59 43 41 39 39 42 42 43 43 43 52 52 52 52 43 43 43 43 57 57 57 57 68 68 68 44 44 34 34 20 32 38 44 59 57 52 52 59 44 59 52 52 43 59 47 57 57 57 68 57 57 57 52 52 52 52 52 52 57 57 68 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 43 50 43 59 59 59 44 43 43 42 36 34 32 14 14 24 32 44 57 57 57 59 43 35 32 29 37 37 43 44 44 57 48 42 37 37 39 44 59 44 44 27 30 27 35 41 41 28 24 18 18 30 28 40 37 25 25 25 27 28 41 46 46 29 25 19 21 15 21 23 39 43 57 57 59 47 47 47 47 47 47 48 48 37 34 33 25 22 22 25 26 36 41 41 39 29 14 18 10 10 10 11 18 21 16 11 11 12 12 28 30 39 37 37 39 39 39 37 32 31 20 18 18 32 32 29 29 32 37 32 27 31 28 39 30 32 32 32 24 25 28 32 28 23 23 32 34 43 47 37 30 14 11 9 10 10 22 15 18 18 23 28 34 39 37 34 34 24 24 30 30 32 25 24 30 30 36 37 39 30 25 27 19 22 25 35 35 19 16 10 10 10 17 27 25 31 34 34 28 22

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no495_l10.g1 MSMg01no495_l10.g1 CHROMAT_FILE:
MSMg01no495_l10.g1 PHD_FILE: MSMg01no495_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:50 2005
         (570 letters)



>mm_chr13_40519142_40520111
          Length = 970

 Score = 1048 bits (542), Expect = 0.0
 Identities = 564/576 (97%), Gaps = 8/576 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacattccgttccaaaggagctagaaacagactgtcttttccatactgggtggagactga 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tacattccattccaaaggagctagaaacagactgtcttttccatactgggtggagactga 252

                                                                       
Query: 61  gcataggaggaaacttccaaagccccactcccaacagtgacacacttcctccaatgaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcataggaggaaacttccaaagccccactcccaacagtgacacacttcctccaatgaggc 312

                                                                       
Query: 121 cacatctcctaatagtactacttctcatgggtcaagcttggtcaaaacccaccacaggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cacatctcctaatagtactacttctcatgggtcaagcttggtcaaaacccaccacaggta 372

                                                                       
Query: 181 tgttcattgtctaaactccaagactaactgtattcaattaaggaagtggaattaaaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgttcattgtctaaactccaagactaactgtattcaattaaggaagtggaattaaaatgg 432

                                                                       
Query: 241 aaagttcttagacttggtatatctgtgcttaaatatgtgtatcctatttgaatgacatga 300
           |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaagctcttagacttggaatatctgtgcttaaatatgtgtatcctatttgaatgacatga 492

                                                                       
Query: 301 tcttgattcaataaaagggtgtgtaaaagtacaagattcttgcctccacagagttgagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcttgattcaataaaagggtgtgtaaaagtacaagattcttgcctccacagagttgagga 552

                                                                       
Query: 361 tccaatgcagaagacacagtcatcaaatttgcatacacacacacacacacaca------- 413
           |||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct: 553 tccaatgcagaagacacagtcatcaaatttgcatacacacacacacacacacacacacac 612

                                                                       
Query: 414 -gtgagtttcagatggtatgatctgagaatatagcacaggaagaacaatatgggggctga 472
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 613 agtgagtttcagatggtatgatctgagaatatagcacaggaagaacaacatgggggctga 672

                                                                       
Query: 473 agagacttggtcaagatgaggaccatcttgacatgagttctcttctcaaaggtcagtaga 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agagacttggtcaagatgaggaccatcttgacatgagttctcttctcaaaggtcagtaga 732

                                               
Query: 533 agtcagctaggaaagtagttaaaccaagggagaagc 568
           ||||||||||||||||||||||||||||||||||||
Sbjct: 733 agtcagctaggaaagtagttaaaccaagggagaagc 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information