NNNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAGTATTACTTCAGTAAGAAGGTTATCTATTCAGTAACATTC
AATTTTACTTCTCATAGAGACGGTGAAACTAATTAGGCATTACAAAGAAT
GGAGCCAGAATAGCTCTGGGCTGGTCTGCAGAGTGTTTACTTGGGACAAT
AGCCAGGCTTACCCAGACAAGGGAATTCACAATGACCTAGCAAATAGGTG
GGTTTACCATGAAAGAGTTAGGGAATCCCCCTGAGACAGGTTTCTTCACT
AGGCCCAAAGAAACAGCTTAATCATGCATTTACTAAGAACCTCTGGTGGT
GGGCTTAACAATAGACTAGCATTACACCTGGCTCCCTTCTTAGAGGCAGT
GGCCTGGTCCCTGCCTTCTTTTGTTGTATACATTCATTTTGTATTGTGTC
TCTGTAACTCAGCATATGTATCTTGCCTGGTTTCTTGTCACTCTTCTGTA
TAAAAAGTTTGATGCTCAACTTGAAAAATTACACTCAGATTCTACACAAT
CTCTCATGTCGCTTCTGTCTGTCATTCTCCAACTCCTTGTCCACCTGCAA
CTAAAGACCCATTCTACACAGACAGGGACAAAAAAAGGGTCTGTGGTAGC
TGAGCACTAATACATCTCTTCTCTGCCTGACTGTAAATGCTGTGATCCAC
CACAAAACAGCCACCATGATTTCTTCACCATGATGCAATGTGTCCCTTTT
AACTGTGAGCCCCAATAAATCTTCAA

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAATGACCCCTTTCTGCCCCCTGTGG
TGTCATTTCTGAGCTCTGATTCAGTAATTTAGAGCTGAGAGAGACTTAAT
AAAATCTCCAAAATGAATTCCAGGGTGGCTCTTGTGAGAGGTTTTTTTCT
TTTCTTTCTTTCTTTTTTTTTTTTCCTCTTCATATGCAGGCAGCTTGCTA
ATGGCCACACTCACTCCTTCTTCTAAGCTGCATGAGTCTAAAGCCCGAAA
GGAATCATTCCTATGGTGGGAGAAACTGCTGATGTTTCAAGATAACCAGC
TCTGTCATAAGCCTCCTGCCCTTAATTTCACTGTTCTCTGTGCAGGCAGA
CAAAAATAGGTTATATAAGGCAGGGTTAGTTTCCTAGATATTCCTGAGAT
GGTGGCTGCTGCTGCTGGATAACTTTGAATATTTGGTGCTCTGTAAAACC
ACAAGGTCTTTATTTTACTGATCATTTCATTAAAATATCCTTCTCCTCTT
AATAAAGCTGATTCATAGTATTTTCCTCCTGTGGCTTCCAAAGGAGAGGG
AGAATCCCATGTTTAGAGAAAGGGATCTCTTACTACAGAATGAATTAAAC
TGATGTAGCAAGCAGGAGCTTTCCCATGAATACTTGAGTGTACTGCTTNA
GCTTTTTTGTCACCTTTATACACACTAGAATCACCTAGGAAGAAGGGGCC
TCAGTTGAGGAATTATCTTCATCAGAATGGTTTGAGACGAATCT

Query= MSMg01no496_m16.g1 MSMg01no496_m16.g1 CHROMAT_FILE:
MSMg01no496_m16.g1 PHD_FILE: MSMg01no496_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:15 2005
         (522 letters)



>mm_chr13_25401947_25402874
          Length = 928

 Score =  978 bits (506), Expect = 0.0
 Identities = 521/530 (98%), Gaps = 8/530 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatgacccctttctgccccctgtggtgtcatttctgagctctgattcagtaatttagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaatgacccctttctgccccctgtggtgtcatttctgagctctgattcagtaatttagag 258

                                                                       
Query: 61  ctgagagagacttaataaaatctccaaaatgaattccagggtggctcttgtgagaggttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgagagagacttaataaaatctccaaaatgaattccagggtggctcttgtgagaggttt 318

                                                                       
Query: 121 ttttcttttctttctttc--ttttttttttttcctcttcatatgcaggcagcttgctaat 178
           ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 319 ttttcttttctttctttcttttttttttttttcctcttcatgtgcaggcagcttgctaat 378

                                                                       
Query: 179 ggccacactcactccttcttctaagctgcatgagtctaaagcccgaaaggaatcattcct 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggccacactcactccttcttctaagctgcatgagtctaaagcccgaaaggaatcattcct 438

                                                                       
Query: 239 atggtgggagaaactgctgatgtttcaagataaccagctctgtcataagcctcctgccct 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggtgggagaaactgctgatgtttcaagataaccagctctgtcataagcctcctgccct 498

                                                                       
Query: 299 taatttcactgttctctgtgcaggcagacaaaaataggttatataaggcagggttagttt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taatttcactgttctctgtgcaggcagacaaaaataggttatataaggcagggttagttt 558

                                                                       
Query: 359 cctagatattcctgagatggtggctgctgctgctg------gataactttgaatatttgg 412
           |||||||||||||||||||||||||||||||||||      |||||||||||||||||||
Sbjct: 559 cctagatattcctgagatggtggctgctgctgctgctgctggataactttgaatatttgg 618

                                                                       
Query: 413 tgctctgtaaaaccacaaggtctttattttactgatcatttcattaaaatatccttctcc 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgctctgtaaaaccacaaggtctttattttactgatcatttcattaaaatatccttctcc 678

                                                             
Query: 473 tcttaataaagctgattcatagtattttcctcctgtggcttccaaaggag 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcttaataaagctgattcatagtattttcctcctgtggcttccaaaggag 728


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 928
Length adjustment: 10
Effective length of query: 512
Effective length of database: 918
Effective search space:   470016
Effective search space used:   470016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)