CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTAGGTTTACCAACTGAAATGAAGGAATTTTTTTTAAATAGTGA
GATATATATTTTTGAATCTAAGGAAAGGGAGACACAAGAGGAATTGATTG
TAAATTATAGTCAAGTAATAGATTGCTTGGCGCTCTATCAAGTAAACTTG
AAATTAAAGGATAATTTTAAAAGTTGGGAAAGAAAACAGCACTGAAATGT
GGAAAACTCTTTTAAACAGATAAAAGATAAATGTGATTATGAACTAGGAA
AATAGAGCTATTGTTACAAATTGCTAATGCTTTGGAACAGTCAATGTACT
ACCTCACTCCTTAGCAATGACACTATCATCACCACCACCACCACCACCAC
CACCACCACCACCACCACCACCACCACTATCATTATTGGATGGTAGGAAT
TTTGGTGATTAATGGTTCTTAGCTGTGTCCTCCAAGAATGAGCCTTTGCT
GAAGAAATGATTATCTACATTCATTCTTCATTTCCTGGAAGCAGATTGCT
TTTACAACTATTCCATGATAAAATAGAAAGGCTGACTTTAAGGGCTGACA
CCCCTGGAATACTATCTCAGCTATCAGCACTAATACCTATACTGATGTCT
ATGTTGTGAGTCTATCTTATAAGTCAACAACTTCTTCTTTCCATTCTATT
TAATCTTCTACAAATATTTCTCTGGAGAATGCTCCACCCACTCTTCCTGT
AGCTCCAT

CCAATGCTTTGGTTAGCCTGGCGGTGGCCTGGCTTCCTATTTTACGTGAC
ACTCTCATTAGATCCTGGTAATTCTCTTTTGAGGGAGACCTCATGCCCTA
GAATCTCTTGACCCTATGTTCAGCATCCTTATTTCATCAGGATATGCTTA
TCTTGACCAGCCTGATATTTCCCCTCACACCTCTCGGAATGGCTAAAATT
GCATATTCTGGTGACACCTAATGCTGGCGTGGATGGGGATAAAGATGAAC
ACTCCTCCTTTGTTGGTGCGAGTGCAGGCTTGTACTATCTCTCTGGACAT
GAGTCGGGCGGATCTTCAGATTACTGGACATACAACTACCGGATGAGCCT
CCTATACCTCTCCTGCGGATATATCCAGAACATGTCCCAATGCGTGAGAA
GGACACTTGCTCCACTATGTTCATAGGCTCCTTATTTATCATATGCTGAA
GCTGGCTACAAACTATATGCCCCTCAACATAGGAATGGATACTCTAACAT
GTGCTATCTCATCCAATGGAGCTACTACTCACTCTATTAATAAGAATGAA
TTTATGACATTCCTATCCTGATGGATGGACCTGAATGCCTTCATCCTGAG
AGACGTAGCTCCTTCGCAAAGAAGCTCACACTATATGGATTCTCTGATCA
GTGGATATTATGCTCAAACCTAGCATACCCAAGATATTACATATGGTTTG
CTTAACACATGAAACTCTTGAGAATGAATACTGAAGTGTGGACACTCTGC
CCCTCCTTAGATTTN

Query= MSMg01no497_c03.b1 MSMg01no497_c03.b1 CHROMAT_FILE:
MSMg01no497_c03.b1 PHD_FILE: MSMg01no497_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:42 2005
         (705 letters)



>mm_chr13_116810829_116811934
          Length = 1106

 Score =  876 bits (453), Expect = 0.0
 Identities = 515/551 (93%), Gaps = 27/551 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccctaggtttac-caactgaaatgaagg-aattttttttaaatagtgagatatat 62
           |||||||||||||| || ||||||||||| ||| |||||||||| |||||||||||||||
Sbjct: 526 gaattccctaggttgacacaactgaaatggaggaaatttttttt-aatagtgagatatat 468

                                                                       
Query: 63  atttttgaatctaaggaaagggagacacaagaggaattgattgtaaattatagtcaagta 122
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 467 atttttgaatctaaggaaagggagacacaagaggaattgattgtaaattatagtcaagaa 408

                                                                       
Query: 123 atagattgcttggcgctctatcaagtaaacttgaaattaaaggataattttaaaagttgg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atagattgcttggcgctctatcaagtaaacttgaaattaaaggataattttaaaagttgg 348

                                                                       
Query: 183 gaaagaaaacagcactgaaatgtggaaaactcttttaaacagataaaagataaatgtgat 242
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaaggaaaacagcactgaaatgtggaaaactcttttaaacagataaaagataaatgtgat 288

                                                                       
Query: 243 tatgaactaggaaaatagagctattgttacaaattgctaatgctttggaacagtcaatgt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tatgaactaggaaaatagagctattgttacaaattgctaatgctttggaacagtcaatgt 228

                                                                       
Query: 303 actacctcactccttagcaatgacactatcatcaccaccaccaccaccaccaccaccacc 362
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 227 actacctcactccttagcaatgacactatcatcatcaccaccaccaccaccaccactacc 168

                                                                       
Query: 363 accaccaccaccaccaccactatcattattggatggtaggaattttggtgattaatggtt 422
           |                        |||||||||||||||||||||||||||||||||||
Sbjct: 167 a------------------------ttattggatggtaggaattttggtgattaatggtt 132

                                                                       
Query: 423 cttagctgtgtcctccaagaatgagcctttgctgaagaaatgattatctacattcattct 482
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 131 cttagctgtgtcctccaagaatgagcctttgctgaggaaatgattatctaaattcattct 72

                                                                       
Query: 483 tcatttcctggaagcagattgcttttacaactattccatgataaaatagaaaggctgact 542
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 71  tcatttcctggaagcagattgcttttagaactattccatgataaaatagaaaggctgact 12

                      
Query: 543 ttaagggctga 553
           |||||||||||
Sbjct: 11  ttaagggctga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1106
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1096
Effective search space:   761720
Effective search space used:   761720
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)