Query= MSMg01no497_h16.b1 MSMg01no497_h16.b1 CHROMAT_FILE:
MSMg01no497_h16.b1 PHD_FILE: MSMg01no497_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:11 2005
(686 letters)
>mm_chr13_40662848_40663931
Length = 1084
Score = 1042 bits (539), Expect = 0.0
Identities = 604/631 (95%), Gaps = 10/631 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctatctatccctctcttcccagagcttgccctgagggataatcacgtggctgg 63
|||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 629 ggaattcctatcaattcctctcttcccagaacttgccctgagggataatcacgtggctgg 570
Query: 64 atcagatcaccaggacccacttggaggccagtatcagcttctgaccttattgccgttctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atcagatcaccaggacccacttggaggccagtatcagcttctgaccttattgccgttctt 510
Query: 124 gctcaactctctacttgagtcaacacccgggcattttagctcagccgtgcaccttgctac 183
|||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 509 gctcaattctctacctgagtcaacacccgggcatttcagctcagctgtgcaccttgctac 450
Query: 184 ctattgtcacaaactttatgagcttcagcaggctcagtctactgaaatataaaaccctgg 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctattgtcacaaactttatgggcttcagcaggctcagtctactgaaatataaaaccctgg 390
Query: 244 cttttgaagtcagagcctttgacaatgatgtctggtgtgggccagttgtaagatccaagc 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 389 cttttgaagtcagagcctttgacaatgatgtctggtgtgggccagttctaagatccaagc 330
Query: 304 cttgagttgggtaggacctttcccttgtggtttgatatgaccctgacgttctagaaggca 363
|||||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||
Sbjct: 329 cttgagttgggtagaaccttttccttgtggtttgatatcaccctgacgttctagcaggca 270
Query: 364 aagggcactaatgctttgaggaatgttcaggcgtggtggtgaggcaggggaggacaaggt 423
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aagggcac--atgctttgaggaatgttcaggcgtggtggtgaggcaggggaggacaaggt 212
Query: 424 gtcaagaa--------gtcaaagtgcccagagcatagtgacataacactccacatgactc 475
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtcaagaacgtttgaagtcaaagtgcccagagcatagtgacataacactccacatgactc 152
Query: 476 tagcacttcattttcatacaactggccaggaaaatatttcgcatttttgccctatgtctg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tagcacttcattttcatacaactggccaggaaaatatttcgcatttttgccctatgtctg 92
Query: 536 agacggtgtgtttcttgtagtcactgtccctcttcacagagtttgaaataaataagtttt 595
|||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 91 agactgtgtgtttcttgtagtcactgtctctctttacagagtttgaaataaataagtttt 32
Query: 596 cttatttacattttttcagttcatgaaataa 626
|||||||||||||||||||||||| ||||||
Sbjct: 31 cttatttacattttttcagttcataaaataa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1084
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1074
Effective search space: 726024
Effective search space used: 726024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_h16.g1 MSMg01no497_h16.g1 CHROMAT_FILE:
MSMg01no497_h16.g1 PHD_FILE: MSMg01no497_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:11 2005
(636 letters)
>mm_chr13_40523941_40524973
Length = 1033
Score = 1079 bits (558), Expect = 0.0
Identities = 617/638 (96%), Gaps = 7/638 (1%)
Strand = Plus / Plus
Query: 1 aggaatatttgctgttttccctggctgaaatctgatggacaaatcttgtgcataga-ttt 59
||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||
Sbjct: 201 aggaatatttgctgtttgccctggctgaaatctgatggacgaatcgtgtgcatagacttt 260
Query: 60 ccatgatccaggaaggctcagctgaagttaatagtttgaagcctctttgctctctctgtt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 -catgatccaggaaggctcagctgaagttaatagtttgaagcctctttgctctctctgtt 319
Query: 120 gaatctgcttctcctgtaagatcttctcagtccactgcaactcttcccaaacttctgatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatctgcttctcctgtaagatcttctcagtccactgcaactcttcccaaacttctgatg 379
Query: 180 tctatgtgtttagtccctttgagcttcttgctgttgacacaattcttctaaggatcacgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctatgtgtttagtccctttgagcttcttgctgttgacacaattcttctaaggatcacgt 439
Query: 240 gttttttatgcactcctttttacacactcgtgatcttatctccccaaactgtcctgtgta 299
| || || ||| || |||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 440 ggaattcatacacaccgttttacacacccgtgatcttatctccccaaactgtcctgcgta 499
Query: 300 tgacttattctttctacttttcctttcacctcccttcctttctcgcctttgaacttctac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgacttattctttctacttttcctttcacctcccttcctttctcgcctttgaacttctac 559
Query: 360 ctacttcccctaaatccttgatttccctcccagcctgaagcccttctacttggggctcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctacttcccctaaatccttgatttccctcccagcctgaagcccttctacttggggctcag 619
Query: 420 aggagggaaggtgtctaaaagaaagcatcatc-gctctttgcgcccagaatagacacttg 478
|||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 620 aggagggaaggtgtctaaaagaaagcatca-ctgctctttgcacccagaatagacacttg 678
Query: 479 ccagctatgaacactgtccagtcgagatgtctggctggagccaatagctatggttctgag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccagctatgaacactgtccagtcgagatgtctggctggagccaatagctatggttctgag 738
Query: 539 acctctgacatagcttgtcatactgggacttctcagcacaccagcctcttgacaactgcc 598
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 739 acctctgacatagcttgtcatattgggacttctcagcacaccagcctctt---aactgcc 795
Query: 599 tgagcacacctggcaggtgtgttaaactattggaagaa 636
||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgagcacacctggcaggtgtgttaaactattggaagaa 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1033
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1023
Effective search space: 640398
Effective search space used: 640398
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
