Query= MSMg01no498_j05.b1 MSMg01no498_j05.b1 CHROMAT_FILE:
MSMg01no498_j05.b1 PHD_FILE: MSMg01no498_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:40 2005
(279 letters)
>mm_chr13_94899453_94900131
Length = 679
Score = 495 bits (256), Expect = e-144
Identities = 271/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 5 gaattcagggtgttttctgttttaaactaagcaagttgctttaaaaaaaaattcaagttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaattcagggtgttttctgttttaaactaagcaagttgctttaaaaaaaaattcaagttt 267
Query: 65 ctataaatggtaaattagtgattgaggatttgttttatataaagattttgtaaattgggc 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctataaatggtaaactagtgattgaggatttgttttatataaagattttgtaaattgggc 207
Query: 125 ccggggcagggtgattcagtctctgaagtacttgccactcagcatgaagacctgagtctg 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 206 ccggggcagggtgattcagtctctgaagtacttgccactcagtatgaagacctgagtctg 147
Query: 185 agctgatctgattcccagtgcacaaatataaagctgg-tgtgtcatagtgtgcctataag 243
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 146 agctgatctgattcccagtgcgcaaatataaagctggctgtgtcatagtgtgcctataag 87
Query: 244 cctatcaatgaggaaacatagacagagaacccgtga 279
|||| |||||||||||||||||||||||||||||||
Sbjct: 86 cctagcaatgaggaaacatagacagagaacccgtga 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no498_j05.g1 MSMg01no498_j05.g1 CHROMAT_FILE:
MSMg01no498_j05.g1 PHD_FILE: MSMg01no498_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:40 2005
(534 letters)
>mm_chr13_94855141_94856074
Length = 934
Score = 1002 bits (518), Expect = 0.0
Identities = 530/534 (99%)
Strand = Plus / Plus
Query: 1 catccagttcaggacatatagtgaccatgggaatgaccgtgatgacgacagtatcctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccagttcaggacatatagtgaccatgggaatgaccgtgatgacgacagtatcctaaa 260
Query: 61 actcctggtgtatcttgaagaactatgaaggaggagttgacagcccatgtttgaggggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcctggtgtatcttgaagaactatgaaggaggagttgacagcccatgtttgaggggag 320
Query: 121 tcccctaggctgctaaggcacctgccaggccatcctttcctaagacgttggcatccagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccctaggctgctaaggcacctgccaggccatcctttcctaagacgttggcatccagtt 380
Query: 181 cagcatgggccgtgagtctgtacctgcctcactcctgatgcccaatagctttcggctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcatgggccgtgagtctgtacctgcctcactcctgatgcccaatagctttcggctgat 440
Query: 241 tacaccagattggtcctgtaaagtgcttgctacttagcatgcgagcagagtagagcagtt 300
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacaccagagtgctcctgtaaagtgcttgctacttagcatgcgagcagagtagagcagtt 500
Query: 301 cattctaacgcttttcatttaaccgctttcccttatgttagaaatatagtttatacctga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 501 cattctaacgcttttcatttaactgctttcccttatgttagaaatatagtttacacctga 560
Query: 361 tatcatgatttaaatgtctagatttaggagttcgcacaacatacacggtcttcagtaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatcatgatttaaatgtctagatttaggagttcgcacaacatacacggtcttcagtaggg 620
Query: 421 ctggacaacctctccttatggaagaaaggggaatatctccttgtcttctgacaaagcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggacaacctctccttatggaagaaaggggaatatctccttgtcttctgacaaagcaaa 680
Query: 481 atttagcaaatgaatttccaggcacatttagtgtgtgtgtgtgtgtgtgtgtgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttagcaaatgaatttccaggcacatttagtgtgtgtgtgtgtgtgtgtgtgt 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
