Query= MSMg01no499_d01.b1 MSMg01no499_d01.b1 CHROMAT_FILE:
MSMg01no499_d01.b1 PHD_FILE: MSMg01no499_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:31 2005
(463 letters)
>mm_chr13_37930320_37931182
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 454/463 (98%), Gaps = 6/463 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagggccagcc---tttcgtctataaagctaattccaaggacagctaggactac 60
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 748 ggaattcagggccagccgggt---gtctataaagctaattccaaggacagctaggactac 692
Query: 61 acagataaactctgtccaggagaatcaaggctggtaatggtgaataagccatcaacatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acagataaactctgtccaggagaatcaaggctggtaatggtgaataagccatcaacatcc 632
Query: 121 ttggggctttgtgggctgacctggggtgagtggcctcagagacaagcactaaccaaatat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 631 ttggggctttgtgggctgacctggggtgagtggcctcagagacaagcactaaccaaatct 572
Query: 181 ggagcgctagtaagccatctccgagaggccatctgatgagtgggcccaactcaggcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggagcgctagtaagccatctccgagaggccatctgatgagtgggcccaactcaggcacca 512
Query: 241 ggggtggctatgcagccgagtgaggcagatactccctcccccagtaagtaagagtcctcc 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 511 ggggtggctatgcagccgagtgaggcagatactccctcccccaggaagtaagagtcctcc 452
Query: 301 cgaggatgacgacttgctgctcagccctggaaccccatggaactttctgggagtcagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cgaggatgacgacttgctgctcagccctggaaccccatggaactttctgggagtcagatt 392
Query: 361 gcagcgcttcccttcatggcaagaacacaggggacacgcctgcgtgccagcctccagtgt 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 gcagcgcttcccttcatggcaagagcacaggggacacgcctgcgtgccagcctccagtgt 332
Query: 421 gtaccaactcagcggaaaacactctgtctgcttccaaaaagat 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtaccaactcagcggaaaacactctgtctgcttccaaaaagat 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_d01.g1 MSMg01no499_d01.g1 CHROMAT_FILE:
MSMg01no499_d01.g1 PHD_FILE: MSMg01no499_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:31 2005
(183 letters)
>mm_chr13_37774077_37774659
Length = 583
Score = 329 bits (170), Expect = 7e-95
Identities = 176/178 (98%)
Strand = Plus / Plus
Query: 5 aattcattaaagtagaagggatcaaggcaattttaagtttctcacatgaaaacagcttga 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 aattcattaaagtagaagggatcgaggcaattttaagtttctcacatgaaaacagcttga 264
Query: 65 aagatacaacatgataatcaaacaattcactatattaataaaaagagtgttgagagagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagatacaacatgataatcaaacaattcactatattaataaaaagagtgttgagagagag 324
Query: 125 ggggaaggagaggaaaaggaatagatagagggacagggagagggagaaagggagaggg 182
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ggggaaggagaggaaaaggaatagagagagggacagggagagggagaaagggagaggg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
