CGACTCACTATTCGGAGAGGATCCGCGGAATTCCAGCCATGCCTTCAGAT
ACCCGCCAAGTGTGCTGAAGAATTTCAGTCTTATGCCTGTGTCTCAAGTC
AGCACTGGTCAAATCGGCTAGCACCTCAGGAGGTAGCAATAGGTCCCAAG
GGAAATAATGCTGACTGGGGGACACTTCTCTTAGTGATTGTGTCTTTAGG
AAAATCTTGTGTCCTTCAAAGCCTAGTACGCATCATCTTTCTTCTGGCTG
CCATGAAATGTATTCCTCTCACTGAGGAAACCGACTGACTCCTTATAGAG
GCTGGCTGGCTATTGGATCAGGACTGGACGCTCAACCTTCCAGACTTCCG
GGAAACCTGCTGACGCATTTCGCTCCCGCCCCTCCTCTCCCCTCCCCTCC
CCTCCCCTTGGTAGGCAGGGAGCCAGGGCAGGGCCAAAGCAGCTCTCAGT
GCTTCAACTGTTAACTCGGATTTTTCCAAAATGTGTTTCTGGTTAGTTTA
AAAAAGGATAAACAAGATTTAATAGCTGGCAATGAATCACATTTTTTTTC
CTCCCTAAACTCTATTTGGATCCACTCAAACGCCTGTCATTCCACTTTTG
TACAAATAAATAAATCTCCTTTTCTTTTGTGCATTTTTCTCTGTCCTGCA
TTTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXACCACTGCTGTTTAGCTAAGTTGACATTGTTGCCAAACTGGCT
TCTAACAATATTTTTATTTATAGGCCTGTATGAATGCCATTTCATCCTTA
ATCAGAGAAGCTTCTCTTTGCAATTAAAAGGCGAATGCTGACACTCCTAG
CTGCTCAGTGTGCTAACAATAAGTGATCACTGAGTCCCTAGCCCTAAGTC
TCGGGGAACATCATGGAAGAGGCAGAAAGAATGTAAGAGCCAGAGGATAG
GGAGAAAGACTGTGAATTACTGCCTTCTGAACAGGGCAGCCATCGTAATC
TTATTCACATAGCAACTGTGCCCCCTGCATTGGGCCTGCGCAAAACCGGG
CCTGTCGATAGTCAATCATGTTTCTGGGAGGGGCTCACAGGGTTCTGTCC
CCCCTTCCCTCCCCCCAATGAACAACTGGCAAGTAATGGACTCTGGGGGA
GACACAGTCAATCCTGTACCCACTGGTGAGAACAGGCTCCAATGGGTCTC
ACGGGCCACCCAGACAGCTTCAGTTAAACTCAGTGGATCACAAAACAAAA
CAAAAGGCATTTATGTGGGCAATGGGCTGGTAGGGAGAGAAGACAGTTGG
CAGGAGCTGGAAGAGGCAGGAAGATGC

Query= MSMg01no501_i18.b1 MSMg01no501_i18.b1 CHROMAT_FILE:
MSMg01no501_i18.b1 PHD_FILE: MSMg01no501_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:24 2005
         (600 letters)



>mm_chr13_99210582_99211580
          Length = 999

 Score =  953 bits (493), Expect = 0.0
 Identities = 518/529 (97%), Gaps = 6/529 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagatacccgccaagtgtgctgaagaatttcagtcttatgcctgtgtctcaagtcagcac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 528 cagatacccgccaagtgtgctgaagaatttcagtcttatgcctgtgtctcgagtcagcac 469

                                                                       
Query: 61  tggtcaaatcggctagcacctcaggaggtagcaataggtcccaagggaaataatgctgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tggtcaaatcggctagcacctcaggaggtagcaataggtcccaagggaaataatgctgac 409

                                                                       
Query: 121 tgggggacacttctcttagtgattgtgtctttaggaaaatcttgtgtccttcaaagccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgggggacacttctcttagtgattgtgtctttaggaaaatcttgtgtccttcaaagccta 349

                                                                       
Query: 181 gtacgcatcatctttcttctggctgccatgaaatgtattcctctcactgaggaaaccgac 240
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 348 gtacgcgtcatctttcttctggctgccatgaaaagtattcctctcactgaggaaaccgac 289

                                                                       
Query: 241 tgactccttatagaggctggctggctattggatcaggactggacgctcaaccttccagac 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 288 cgactccttatagaggctggctggctattggatcaggactggacgctcaaccttctagac 229

                                                                       
Query: 301 ttccgggaaacctgctgacgcatttcgctcccgcccctcctctcccctcccctcccctcc 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttccgg-aaacctgctgacgcatttcgctcccgcccctcctctcccctcccctcccctcc 170

                                                                       
Query: 361 cct-----tggtaggcagggagccagggcagggccaaagcagctctcagtgcttcaactg 415
           |||     ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cctccccttggtaggcagggagccagggcagggccaaagcagctctcagtgcttcaactg 110

                                                                       
Query: 416 ttaactcggatttttccaaaatgtgtttctggttagtttaaaaaaggataaacaagattt 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttaactcggatttttccaaaatgtgtttctggttagtttaaaaaaggataaacaagattt 50

                                                            
Query: 476 aatagctggcaatgaatcacattttttttcctccctaaactctatttgg 524
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  aatagctggcaatgaatcacattttttttcctccctaaactctatttgg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 999
Length adjustment: 10
Effective length of query: 590
Effective length of database: 989
Effective search space:   583510
Effective search space used:   583510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)