Query= MSMg01no501_j12.b1 MSMg01no501_j12.b1 CHROMAT_FILE:
MSMg01no501_j12.b1 PHD_FILE: MSMg01no501_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:27 2005
(530 letters)
>mm_chr13_67443051_67443980
Length = 930
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgatgttccctaaatttgttgagcattttgacgtgttcttttcatttgtaaa 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgatgatccctaaatttgttgagcattttgacgtgttcttttcatttgtaaa 264
Query: 65 tattctctacattgtgagttaattggcctagatacaggtataactttgtaaaggaggctt 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 tattctctacattgtgagttaattggtctagatacaggtataactttgtaaaggaggctt 324
Query: 125 ttccacgatcctcacttttgcatattttctttccagaatgagttatcaaataaggaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccacgatcctcacttttgcatattttctttccagaatgagttatcaaataaggaaaaa 384
Query: 185 gaatctggaaagttctaaaggatttacctgatacatcccaagtttagggtttctcacctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatctggaaagttctaaaggatttacctgatacatcccaagtttagggtttctcacctg 444
Query: 245 tgtggattctcttttcagaaagtacttatggactatagaaggtcaggccacgtacttcat 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 tgtggattctcttttcagaaagtacttatggacaatagaaggtcaggccacgtacttcat 504
Query: 305 atttgtaggacttctctcttgcatggattgttatgtttgtaaagtcgccactgataattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttgtaggacttctctcttgcatggattgttatgtttgtaaagtcgccactgataattg 564
Query: 365 aagaccttgccacatacttcacacttgtagggattctcttctgtttgaactttcttatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaccttgccacatacttcacacttgtagggattctcttctgtttgaactttcttatgt 624
Query: 425 ttctaaggtcctgatggataatcaaaggctttgccacacatttcacaactgtatggtttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctaaggtcctgatggataatcaaaggctttgccacacatttcacaactgtatggtttc 684
Query: 485 tttcttgtatgaattttcgtacagtttgaaagtgttgatggggggt 530
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttcttgtatgaattttcgtacagtttgaaagtgttgatggggggt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_j12.g1 MSMg01no501_j12.g1 CHROMAT_FILE:
MSMg01no501_j12.g1 PHD_FILE: MSMg01no501_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:27 2005
(534 letters)
>mm_chr13_67591717_67592649
Length = 933
Score = 1002 bits (518), Expect = 0.0
Identities = 530/534 (99%), Gaps = 1/534 (0%)
Strand = Plus / Minus
Query: 1 ctacaagtgtggagaatgtggcaaaaggttttgttcttttccacaccttcaatatcacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctacaagtgtggagaatgtggcaaaaggttttgttcttttccacaccttcaatatcacca 545
Query: 61 aagatttcattctggagagaaaccatacaaatgtgaacaatgtgggaaaacattttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aagatttcattctggagagaaaccatacaaatgtgaacaatgtgggaaaacattttctac 485
Query: 121 tctctcttaccttccttggcataaattgcgtcattctggggagaagtcatacaaatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tctctcttaccttccttggcataaattgcgtcattctggggagaagtcatacaaatgtga 425
Query: 181 aaaatgtgggaaaatgttttactctactttggaccttaaaaaacaccaaaaaattcatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaaatgtgggaaaatgttttactctactttggaccttaaaaaacaccaaaaaattcatga 365
Query: 241 atataattgttgttgaatgtcactatggctttcctaattatgcagcccttactgcacacc 300
|||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atataagtg-tggggaatgtcactatggctttcctaattatgcagcccttactgcacacc 306
Query: 301 agagagttcatactggagagaaacctcatgtatgcgaacaatgtgggaaagacttttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agagagttcatactggagagaaacctcatgtatgcgaacaatgtgggaaagacttttcta 246
Query: 361 ggatcgatagcctcaatcagcatcagcttgttcatactggagagaaaccctataaatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggatcgatagcctcaatcagcatcagcttgttcatactggagagaaaccctataaatgtg 186
Query: 421 aaaaatgtggcaagtgcttttaccgatcttcatcccttaaaagacatcaaggaattcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaaatgtggcaagtgcttttaccgatcttcatcccttaaaagacatcaaggaattcact 126
Query: 481 cttaatagaaaatttgacaagtgatatgtgataaaaaatcttgcaaaatattca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttaatagaaaatttgacaagtgatatgtgataaaaaatcttgcaaaatattca 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
