Query= MSMg01no502_f24.b1 MSMg01no502_f24.b1 CHROMAT_FILE:
MSMg01no502_f24.b1 PHD_FILE: MSMg01no502_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:23 2005
(573 letters)
>mm_chr13_37736933_37737909
Length = 977
Score = 1060 bits (548), Expect = 0.0
Identities = 562/568 (98%), Gaps = 4/568 (0%)
Strand = Plus / Plus
Query: 10 gaattcctagagactcttgttctgttttta-aatgtgccctgtggttttccagactccca 68
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 210 gaattcctagagacccttgttctgtttttacaatgtgccctgtggttttccagactccca 269
Query: 69 aggtttggtccagcatccctgctataagggctgaatccttcagcattctagagctttgct 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aggtttggtccagcatccctgctataagggctgaatccttcagcattctagagctttgct 329
Query: 129 aagaataacctaatgcttttgttctagcttatcactaatagagggcaggtcaaggctttt 188
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 aagaataacctaatgcttttgttctagcttatcactaatagagggcacgtcaaggctttt 389
Query: 189 gttcactgtaccgtgcttctccagccggaagataagatgaagcacaggtctttaatcttt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gttcactgtaccgtgcttctccagccggaagataagatgaagcacaggtctttaatcttt 449
Query: 249 tcatcagggagttaattcactttattggttccagtgttttacttcagctgatgaaatgcc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tcatcagggagttaattcactttattggttccagtgttttacttcagctgatgaaatgcc 509
Query: 309 attataatctccaaaacagtccatgtttattgactgctccctacctaccaggtgatactg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attataatctccaaaacagtccatgtttattgactgctccctacctaccaggtgatactg 569
Query: 369 aagtcctgaatcctgtgacttgatcctatgatgtatgcctatgccagtttttcattacta 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aagtcctgaatcctgtgacttgatcctatgatgtatgcctatgccagtttttcattacta 629
Query: 429 taataaacccccctgataaacctacttataaataaaagaagtttatttagcttacaggtt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 taataaacccccctgataaacctacttataaataaaagaagtttatttagcttacaggtt 689
Query: 489 ttttttggggggggg---tcctaggacatggtgcctacaacaggtcagttctagcaggga 545
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ttttttggggggggggggtcctaggacatggtgcctacaacaggtcagttctagcaggga 749
Query: 546 cctcatggtgattggtgaatagttgaag 573
||||||||||||||||||||||||||||
Sbjct: 750 cctcatggtgattggtgaatagttgaag 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 977
Length adjustment: 10
Effective length of query: 563
Effective length of database: 967
Effective search space: 544421
Effective search space used: 544421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_f24.g1 MSMg01no502_f24.g1 CHROMAT_FILE:
MSMg01no502_f24.g1 PHD_FILE: MSMg01no502_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:23 2005
(565 letters)
>mm_chr13_37915983_37916948
Length = 966
Score = 758 bits (392), Expect = 0.0
Identities = 407/414 (98%), Gaps = 6/414 (1%)
Strand = Plus / Minus
Query: 1 tctagaactaaagaaaaacagttggaccattacccctgacttgagataagtaggctaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctagaactaaagaaaaacagttggaccattacccctgacttgagataagtaggctaaac 355
Query: 61 cacagactgcgagggaactgtttgacttccagtcatcaaaaataagttttcagaacctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cacagactgcgagggaactgtttgacttccagtcatcaaaaataagttttcagaacctgt 295
Query: 121 tacatttcccagggtctactgtttactgagcaaaactctatctggtgaaacttttagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tacatttcccagggtctactgtttactgagcaaaactctatctggtgaaacttttagcag 235
Query: 181 tgacattttttttt-cctttctccccacaaagtcctcaggctggccttgaacttattagc 239
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 234 tgacattttttttttcctttctccccacaaagtccccaggctggccttgaacttattagc 175
Query: 240 tgaggatgaccttgaacttatgaccctagtatcattgtgccccatttgtgacatgctagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tgaggatgaccttgaacttatgaccctagtatcattgtgccccatttgtgacatgctagc 115
Query: 300 atgggcttcgtgctaggcactaatagccttagcaactccacctttctttcttt--ctttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 114 atgggcttcgtgctaggcactaatagccttagcaactccacctttctttctttttctttt 55
Query: 358 t---tttttttttttcttttctttttggttttgtttttttgagacagggtctca 408
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tctttttttttttttcttttctttttggttttgtttttttgagacagggtctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 966
Length adjustment: 10
Effective length of query: 555
Effective length of database: 956
Effective search space: 530580
Effective search space used: 530580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
