Query= MSMg01no502_n05.b1 MSMg01no502_n05.b1 CHROMAT_FILE:
MSMg01no502_n05.b1 PHD_FILE: MSMg01no502_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:57 2005
(426 letters)
>mm_chr13_40945545_40946370
Length = 826
Score = 615 bits (318), Expect = e-180
Identities = 387/430 (90%), Gaps = 35/430 (8%)
Strand = Plus / Minus
Query: 1 taagacacagacccgagtcaggaggagtctaacaagaggtaaaaaaacaaaacaaaacaa 60
||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 596 taagacacagacccgagtcaggaggagtctaacaagaggta-----------------aa 554
Query: 61 aaaaaaaaaacaaaaaaaaaaaaccggcttcatcactagctgtaccttttaccaacaaag 120
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaaaaaaaaa-aaaaaaaaaaaa-cggcttcatcactagctgtaccttttaccaacaaag 496
Query: 121 gtattaaaggcatgcactgccacctggcctagcagtttatttcaaacgacataacatgcc 180
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 495 gtattaaaggcatgca------------ctagcagtttatttcaaacgacataacatgcc 448
Query: 181 atgctgtggtggtggccttctttttattaataatggtcctgtccgtgtatcagtttacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gggctgtggtggtggccttctttttattaataatggtcctgtccgtgtatcagtttacaa 388
Query: 241 accatttttgtggtggggtcaggagaaaagggacagcgattc----tttttttttttaaa 296
|||| ||| | ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 387 accagtttggaggtggggtcaggagaaaagggacagcgattctttttttttttttttaaa 328
Query: 297 gatttatttatttattatatgtaagtacactgtagctgtcttcagacactccaaaaaagg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 327 gatttatttatttattatatgtaagtacactgtagctgtcttcagacactccagaagagg 268
Query: 357 gcgtgagatcttgttacagatggttgtgagccaccatgtggtagctgggatttgaactct 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcgtgagatcttgttacagatggttgtgagccaccatgtggtagctgggatttgaactcc 208
Query: 417 ggaccttcgg 426
||||||||||
Sbjct: 207 ggaccttcgg 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_n05.g1 MSMg01no502_n05.g1 CHROMAT_FILE:
MSMg01no502_n05.g1 PHD_FILE: MSMg01no502_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:57 2005
(326 letters)
>mm_chr13_40765263_40765988
Length = 726
Score = 623 bits (322), Expect = 0.0
Identities = 325/326 (99%)
Strand = Plus / Plus
Query: 1 caacaaatatgaagcatctccaaagtgagaattgaaaaaatgatgcagagaggttgggga 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 caacaaatatgaagcatctccaaagtgagaactgaaaaaatgatgcagagaggttgggga 260
Query: 61 tgcgactgaattggtcaagtagagcacttgactggcataccgaggccatggcttccaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcgactgaattggtcaagtagagcacttgactggcataccgaggccatggcttccaccc 320
Query: 121 ctagctctacaaaccaaaagcaagaaccaagcaatgaatcaaaagatagggagcatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagctctacaaaccaaaagcaagaaccaagcaatgaatcaaaagatagggagcatgaag 380
Query: 181 tgggcgaacagtgtgcggtgagggtcttagaaacatgcaaagacactcaactgagatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggcgaacagtgtgcggtgagggtcttagaaacatgcaaagacactcaactgagatgct 440
Query: 241 gacatcagatgaaggaatccagtgtcctccaggacactggatgaacgaacaagcaggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatcagatgaaggaatccagtgtcctccaggacactggatgaacgaacaagcaggaca 500
Query: 301 ctgtgctaagtgaaataagtcgagag 326
||||||||||||||||||||||||||
Sbjct: 501 ctgtgctaagtgaaataagtcgagag 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
