CTTCAACCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXGCCGCGGAATTCTCTGTTTACATTTTTGGGGTTGCTTATGTATTCTAT
CAAATCAAAAGATGCTCCAACATATAGAAAGGACACATGCTCCACTATGT
TCTTAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAACAACCCAGATGT
CCCTCATCAAAAGAATGGATACAGAAAATGTGGTACATTTACACAATGCA
GTACTACTCAGCTATTAAAAACAATGACTTTATGGAATTTGCAGGCAAAT
GGATGGAACTAGAAAATATCCTGAGTGAGGTAGCCCAGACATAAAAGGAC
ACACATGGTATGTACTCACTGATAAGTGGATATTAGCCCAAAAGCTCAGA
ACACCCATGATACAACTCACAGACCATATGAGGCTTAACAAGAAGGAAGA
CCAACGTGTGGATGCTTCAGTCCTACTTAGAAGGGGAACAAAATAATCAT
GGGAGGTAGAGGGAGGGAGGGCATGGGAGGGAGAGAAGAGGGGGAGTANT
TNNNTNTTTTTTGTTTTTGTTTTTNTTTTGTTGTTTTTTTTTTTGTTTTT
GTTTTGTTTTTTTTTGTTGTGTTTGTTTGTGTTGGTCTGGTTTTGTTGTT
GTTTCGGTGTTTCGCCTTTTTTTTTTTTCGTCTTGTCCGCTCTTCTCCCT
ATCTTTTTTTTCCCCTTTCTCCCACTCGTTTTCTTGTTTCGTTC

AATTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAAACAGGTACAAAACCTC
ATCTGATGACTGAACAGGAGTGGAGGAGCCTTGGTGTTCAACAGAGTCTA
GGACGGGTTCAGTACACCACTCAGGAGTCAAAACTGCACATTCTCTTTAG
ACACCTTTTCCAACACACACACACATTAAGTATAGCTGGGGTCATCTAAT
CTTTTTCAAATTTAATGTTTATGTGTATATAAGGTAGTATTCAGTGAATA
CTTGAAAAACACACAAATCTTTCTCTCTTATCAACAAGTGCTCAGTTAAA
TACAACTGCAAGTAGGTTCTTTTAAGTTACTGAAAACAAATTTTCTTGTA
GTTTTCTTTTCTTAATACAAGTGCATGTTTTATTTTACCTGTTACTTTTA
GTAAATAAAGTTTGTATGTTGCAGGGAGGGAAGGAGGGAGGGAAGGTATA
CCGGTATATGTATCTAAAGGTCTGGCATGGTGTGCCTGGGAAGCAGAAGC
AGGCAATCTGAGACAACCTGGTCTACACAGTGTGCTCCAGGACAGCCAGG
GCTATGTAAATAGACCCTATCTCAAAAAAAAAAAAAAAAAAAAAAAGAGT
TAGGGGTTAATAGAAATGACACACACTGGTATTCCCATCATTCTGTATTC
TGAGACAGGAGGATCAGAAGGTCCGGTAACTGGCTTTTAATAGTGTGAGG
GCCCATGGTTG

Query= MSMg01no504_k06.g1 MSMg01no504_k06.g1 CHROMAT_FILE:
MSMg01no504_k06.g1 PHD_FILE: MSMg01no504_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:18 2005
         (568 letters)



>mm_chr13_99582516_99583483
          Length = 968

 Score = 1013 bits (524), Expect = 0.0
 Identities = 555/574 (96%), Gaps = 17/574 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctaaacaggtacaaaacctcatctgatgactgaacaggagtggaggagccttggtgttc 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tctaaacaggtacaaaacctcatctgatgtctgaacaggagtggaggagccttggtgttc 260

                                                                       
Query: 61  aacagagtctaggacgggttcagtacaccactcaggagtcaaaactgcacattctcttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagagtctaggacgggttcagtacaccactcaggagtcaaaactgcacattctcttta 320

                                                                       
Query: 121 gacaccttttccaacacacacacacat-taagtatagctggggtcatctaatctttttca 179
           ||||||||||||||||||||||||||| |||       ||   |||||||||||||||||
Sbjct: 321 gacaccttttccaacacacacacacatctaa-------tg---tcatctaatctttttca 370

                                                                       
Query: 180 aatttaatgtttatgtgtatataaggtagtattcagtgaatacttgaaaaacacacaaat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aatttaatgtttatgtgtatataaggtagtattcagtgaatacttgaaaaacacacaaat 430

                                                                       
Query: 240 ctttctctcttatcaacaagtgctcagttaaatacaactgcaagtaggttcttttaagtt 299
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctttcactcttatcaacaagtgctcagttaaatacaactgcaagtaggttcttttaagtt 490

                                                                       
Query: 300 actgaaaacaaattttcttgtagttttcttttcttaatacaagtgcatgttttattttac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 actgaaaacaaattttcttgtagttttcttttcttaatacaagtgcatgttttattttac 550

                                                                       
Query: 360 ctgttacttttagtaaataaagtttgtatgttgcagggagggaaggagggagggaaggta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctgttacttttagtaaataaagtttgtatgttgcagggagggaaggagggagggaaggta 610

                                                                       
Query: 420 taccggtatatgtatctaaaggtctggcatggtgtgcctgggaagcagaagcaggcaatc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 taccggtatatgtatctaaaggtctggcatggtgtgcctgggaagcagaagcaggcaatc 670

                                                                       
Query: 480 tgag------acaacctggtctacacagtgtgctccaggacagccagggctatgtaaata 533
           ||||      ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgagttaaaaacaacctggtctacacagtgtgctccaggacagccagggctatgtaaata 730

                                             
Query: 534 gaccctatctcaaaaaaaaaaaaaaaaaaaaaaa 567
           ||||||||||||||||||||||||||||||||||
Sbjct: 731 gaccctatctcaaaaaaaaaaaaaaaaaaaaaaa 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)