NAGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTATTGTTTCTTTCTCCTGCTTACAGGTGCATTCAACACACCA
AGCTTAGAATGTTTTAAGTATATCTTCTAATACATATTTGTTATATTTAT
TTGTAATGTATAGTTTAACATTGAAGATTTTTATACCAGCAGCTTGAGTT
CAGGAAAATTGGTTTGCCAAAGTTTATGCACCTTATAAATGCAGAACAGG
ATTTGAATGCAACATTCTCTGCTTTCACAGCCTATTAATTTCATTCTGCA
ACATTTATTGTAAATGGACACATTGATAATTCATTTACCTGTTACTACAC
TGAACTCATAAACATTGGGTTATGATTGTTGAAATGAAAACTACAAAGGT
TTGCTTGCTACATTCACTCAGTTGACTTGGGGAGCAGTCCTTTGAGTGCA
CACAAATTTCTTTGTTTATAACCAAAACTCTAAACTGGAGTCAAGATGCA
TGGTAATAAAAACCTTCTGATTTCTGGAAGGATGGACTCACATCCTTTAT
TTAAGGCATTTTGCAGAACCCAAAGCATTCATAAACAGCTGGAATATTAC
CTGTTAAATGAATCTCTTTCCTGTTGTCATTGCTTTAGCAATATAAACAG
GCTCAAATGAACTAACTGGTGGTTTCTCTCTTCCTTATATTGCATTCAGA
TATCAGTATCTGCTGAGAGAGATTTAAAAAAAAAACAATCAGATATCTTT
CCTTGTCTAAAATTCAGTGCAAAG

NACCGATGAAGTGNGTATGCTGGNGGCCGCCTGGTTCTAAACAGGGGGGT
GACACTATAGAATTTTCCGCAAAATGCTTACCTGAGGAATACCGAATGGC
AGAGAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACACTGAGATTCCACTTCACTCCAGTCAGGATGGCTAAG
ATCAAAAACTCAGGTGACAGCAGATTTTGGCGAGGATGTGGAGAAAGGGG
AACACTCCTCCATTGTTAGTGGGATTGCAAGCTTGTACAACCACTCTGGA
AATCAGTCTGGCGGTTCCTCTTTATTATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTA
AGAAGAACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAATGAA
TTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAG
TGAAGTAACCCAATCACAAAGGAACTCGCACAATATGTACTCCCTGATAA
GTGGATAATAGCCCAAAAACTTAGGATACCCAAGATATAAGATATAACTT
GCCAAACACATGAAATTCTAGAAGAATGAAGACCAAAGTGTGGACACTTT
ACCCTTTCTTAGAAATGGGAACAAGACACCC

Query= MSMg01no505_o20.b1 MSMg01no505_o20.b1 CHROMAT_FILE:
MSMg01no505_o20.b1 PHD_FILE: MSMg01no505_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:57 2005
         (639 letters)



>mm_chr13_106977221_106978256
          Length = 1036

 Score = 1064 bits (550), Expect = 0.0
 Identities = 588/602 (97%), Gaps = 3/602 (0%)
 Strand = Plus / Minus

                                                                        
Query: 38   gcattcaacacaccaagcttagaatgttttaagtatatcttctaatacatatttgttata 97
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1036 gcattcaacacaccaagcttaggatgttttaagtatatcttctaatacatatttgctata 977

                                                                        
Query: 98   tttatttgtaatgtatagtttaacattgaagatttttataccagcagcttgagttcagga 157
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  tttattggtaatgtatagtttaacattgaagatttttataccagcagcttgagttcagga 917

                                                                        
Query: 158  aaattggtttgccaaagtttatgcaccttataaatgcagaacaggatttgaatgcaacat 217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  aaattggtttgccaaagtttatgcaccttataaatgcagaacaggatttgaatgcaacat 857

                                                                        
Query: 218  tctctgctttcacagcctattaatttcattctgcaacatttattgtaaatggacacattg 277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 856  tctctgctttcacagcctattaatttcattctgcaacatttattgtaaatggacacactg 797

                                                                        
Query: 278  ataattcatttacctgttactacactgaactcataaacattgggttatgattgttgaaat 337
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 796  ataattcatttacctgttactacactgcactcataaacattgggttatgattgttgaaat 737

                                                                        
Query: 338  gaaaactacaaaggtttgcttgctacattcactcagttgacttggggagcagtcctttga 397
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  gaaaactgcaaaggtttgcttgctacattcactcagttgacttggggagcagtcctttga 677

                                                                        
Query: 398  gtgcacacaaatttctttgtttataaccaaaactctaaactggagtcaagatgcatggta 457
            |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  gtgcaggcaaatttctttgtttataaccaaaactctaaactggagtcaagatgcatggta 617

                                                                        
Query: 458  ataaaaaccttctgatttctggaaggatggactcacatcctttatttaaggcattttgca 517
            ||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 616  ataaaaac---ctgatttctggaaggatggactcacatcttttatttaaggcattttgca 560

                                                                        
Query: 518  gaacccaaagcattcataaacagctggaatattacctgttaaatgaatctctttcctgtt 577
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 559  gaacccaaagcattcataaacagctggaatattacctgttaaatgattctctttcctgtt 500

                                                                        
Query: 578  gtcattgctttagcaatataaacaggctcaaatgaactaactggtggtttctctcttcct 637
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499  gtcattgctttagcaatataaacaggctcaaatgaactaactggtgttttctctcttcct 440

              
Query: 638  ta 639
            ||
Sbjct: 439  ta 438


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1036
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1026
Effective search space:   645354
Effective search space used:   645354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)