Query= MSMg01no506_l09.b1 MSMg01no506_l09.b1 CHROMAT_FILE:
MSMg01no506_l09.b1 PHD_FILE: MSMg01no506_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:00 2005
(511 letters)
>mm_chr13_26908621_26909532
Length = 912
Score = 882 bits (456), Expect = 0.0
Identities = 498/512 (97%), Gaps = 1/512 (0%)
Strand = Plus / Plus
Query: 1 accagctcaattcaaacaacaaaaagcattctaggtattcacccaaaggagcagaataat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 accagctcaatttaaacaacaaaaagcattctaggtattcacccaaaggagcagagtaat 260
Query: 61 tagaagaattcaatataatgagtatgcgtgttagaactgacaagatatggacaactaatg 120
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 261 tagaagaattcaatataatgagtatgtgtgttagaactgacaagatatagacaactaatg 320
Query: 121 aattcatggccttacttagacttttatttgtaatcatggtggattgatatttcatctgaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aattcatggccttacttagacttttatgtgtaatcatggtggattgatatttcatctgaa 380
Query: 181 agtgatccaagagttgctcagagaatcagttagtgtctgataaattaaaaatgaaatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgatccaagagttgctcagagaatcagttagtgtctgataaattaaaaatgaaatctc 440
Query: 241 agacagtgtgctaagaaaaaaggtt-attccttgaatgtgtataactatctaatgataat 299
||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 agacagtgtactaagaaaaaaagtttattccttgaatgtgtataactatctaatgataat 500
Query: 300 ctaagttgaacattgaaaataattcactaaatgataggtataatggattatgaaaaaatt 359
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 501 ctaagttgaacattgaaaataattcactaaatgataggtataatggagtatgaaaaaaat 560
Query: 360 attattttgttggggataattattcttcttctttgcaaaagcatatttaaaattcagccc 419
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 attattttgttggggataatgattattcttctttgcaaaagcatatttaaaattcagccc 620
Query: 420 tgactgttcagacctactgtaacaggactttagaaaacaaagaaccaaccaaccaaatac 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 tgactgttcagacctactgtaacaggactttagaaaacaaagaagcaaccaaccaaatac 680
Query: 480 aaaattaaaatactattaaaatcgaggtggct 511
||||||||| ||||||||||||||||||||||
Sbjct: 681 aaaattaaattactattaaaatcgaggtggct 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_l09.g1 MSMg01no506_l09.g1 CHROMAT_FILE:
MSMg01no506_l09.g1 PHD_FILE: MSMg01no506_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:00 2005
(464 letters)
>mm_chr13_27044818_27045679
Length = 862
Score = 578 bits (299), Expect = e-169
Identities = 330/341 (96%), Gaps = 2/341 (0%)
Strand = Plus / Minus
Query: 123 agtatactttctcacactcatggggcccaggtagcaaagactgggacaggaagatgaacc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 agtatactttctcacactcatggggcccaggtagcaaagactgggacaggaagatgaacc 803
Query: 183 caggtgataaaccagaaagccctttgcccagagagctacttccttaaccaatggttccaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 caggtgataaaccagaaagccctttgcccagagagctacttccttaaccaatggttccaa 743
Query: 243 aacctctttttacaataccatcagctgaggactaaacattcaaacacaaagccggtggaa 302
|||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 742 aacctcctaaaacaataccatcagctgaggactaaacattcaaacacaaaactggtggaa 683
Query: 303 aacagttcacattcaaccatatgacactataggaactcctagcatataaagctattaaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aacagttcacattcaaccatatgacactataggaactcctagcatataaagctattaaga 623
Query: 363 gaaatctgaacagaaagtctgtaaatgttcaatatcaatacattgccctcaaatataacc 422
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 622 gaaatctgaacagaaagtc--taaatgttcaatatcaatacattgtcctcaaatataacc 565
Query: 423 aaattagagttaatgtgttatggatgtggaatccccatatc 463
||||||| | |||||||||||||||||||||||||||||||
Sbjct: 564 aaattagcgctaatgtgttatggatgtggaatccccatatc 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 862
Length adjustment: 10
Effective length of query: 454
Effective length of database: 852
Effective search space: 386808
Effective search space used: 386808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
