NCCCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGCCAATTGTCTGAATAATCTTGGAAGAGAGCCATGTGCTCCAG
ATGAGAATCATGGGGATTGGATCATGGCCTGCTGCAATTGAGTTCTAAAA
GCAGAGGCTTGACTCAGCCATTGAACACTGAGATGTGACATACTTGTGTT
GTTTCATGTTGACAGGTTAATGGTAACTTCTTACTTGGCACAAAGAACTT
CTGACACATGAATGCCCAGTTTACATGGCATCTTCAACTATTTGGGAAAC
CTCTATTATAGGTTTTAATTATACTAGATTTCCCTAGAATGGATAAATTT
CAATATAAGCCACAATCCTTGTTTCCTAATGCAAACTGGTCTTGCTCAAA
AGTGTAATATTCTGTTATGCTTTAGAGAAGATTTTCAAATTCTCATTAGC
TTTCTTCAAATCCACTATGATAATGGCTCAGAAAAAAAGAAAATGGATTA
AATGATTCACTGAAGAACATTTTCCTATGCAGGTTCCAAGATGGAAAATC
TGAGCTTTCTCCTGCAATAATAAGTGCTTATTCAAGACATAAAAGTTTTT
ACCTTGGCCTCATGGTTCAGACCTAATCTCTGCACTTGAACAGTAATTTG
GATAGACCAAGAGGATATTTACAGTGCTTCATTTAATGGAAATTTCAGAA
TAGTTTCAATTTAAGGAGAAAAAAATCATATGCTAGTATTGCTAAGACTC
N

CCTTCGATGCTANGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGAGGATTGGGNATNCNTN
GNNCNCCCCTCCGGGGGGGNNNCCCGGGNNNCCCCCTTAAAAAGGGGCGG
GGGGGGCNCAAAAAAAGGGCGCCCCCGCGGGGGGGCCCCCCCCCCGTTTT
TTTTATTATTTCTCTGGGGGGGGGGGGGGGATTANGGNNNNTTCAGGAGT
CATTGGGGTCAGTCCAAGAATCATTCTTCTGGGTTTTCCCCGGGGGGAAT
CTCCCGCCCCGAAGNGGGTAATTCCTTGGCACCAGGAACAGCTTTGGCCC
TTTTTTCCCGGGCCCGAAAGAATAAAGGATTTTTGCCCCTGGCGGGGGGG
GAAACCATTTTTTTGGCCCTGGAACTTTTTGGGCCAGGCAAAAAAATTCT
TTTTGGGTTTTCCGGGGGAATTCTCCCTCCCCAAAAAGGGTATTTCTTTT
GTGGCCCCAGGGGGCGGGGGGGGGAACACACTTTTTTTTTTTCCCCCGCG
GCGCCCCAAAAAGAGAATAAAGGGGGGGGCTTTTTTTTTTCTTTCCCTAG
GGGGATAAAAAAAAAACCCTTCTTTTTTTTTCCCTCAGAGAAAAATTATT
TGTGGTGGCCTCCCACAAAACACATTCTTTTTTAAANTTCTTCCGGGGGG
GAACCCCTTTTTTTGTCGCAAGAAGGTTTTTCTCCCTCTTTATTTAAAAA
AAAAATTTTTTTTTGTTGTTGTCTTTAGAACCACCTCCCCCTTCCCAAAG
AAAGGTTTTTTTTTTCTTTTCTCTCCACTTTCCTTTCTTTTATTAAG

Query= MSMg01no509_b01.b1 MSMg01no509_b01.b1 CHROMAT_FILE:
MSMg01no509_b01.b1 PHD_FILE: MSMg01no509_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:11 2005
         (650 letters)



>mm_chr13_76661736_76662785
          Length = 1050

 Score = 1127 bits (583), Expect = 0.0
 Identities = 631/647 (97%), Gaps = 2/647 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgccaattgtctgaataatcttggaagagagccatgtgctccagatgagaatca 64
           ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 907 gaattctgccaatggtgtgaataagcttggaagagagccatgtgctccagatgagaatca 848

                                                                       
Query: 65  tggggattggatcatggcctgctgcaattgagttctaaaagcagaggcttgactcagcca 124
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 847 tggggattggatcatggcctgctgcaattgagtcctaaaagcagaggcttgactcagaca 788

                                                                       
Query: 125 ttgaacactgagatgtgacatacttgtgttgtttcatgttgacaggttaatggtaacttc 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 787 ttgaacactgagatgtgacatacttgtgttgtttcatgttgacaggttaatggtaatttc 728

                                                                       
Query: 185 ttacttggcacaaagaacttctgacacatgaatgcccagtttacatggcatcttcaacta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttacttggcacaaagaacttctgacacatgaatgcccagtttacatggcatcttcaacta 668

                                                                       
Query: 245 tttgggaaacctctattat-aggttttaattatactagatttccctagaatggataaatt 303
           ||||||||||||||||||| | ||||||||| |||||||||||||||| |||||||| ||
Sbjct: 667 tttgggaaacctctattatga-gttttaattgtactagatttccctaggatggataagtt 609

                                                                       
Query: 304 tcaatataagccacaatccttgtttcctaatgcaaactggtcttgctcaaaagtgtaata 363
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tcaatataagccacagtccttgtttcctaatgcaaactggtcttgctcaaaagtgtaata 549

                                                                       
Query: 364 ttctgttatgctttagagaagattttcaaattctcattagctttcttcaaatccactatg 423
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 548 ttctgttatgctttaaagaagattttcaaattctcattagctttcttcaaatccaccatg 489

                                                                       
Query: 424 ataatggctcagaaaaaaagaaaatggattaaatgattcactgaagaacattttcctatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 488 ataatggctcagaaaaaaagaaaatggattaaatgattcactgaagaacattttcttatg 429

                                                                       
Query: 484 caggttccaagatggaaaatctgagctttctcctgcaataataagtgcttattcaagaca 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 428 caggttccaagatggaaaatctgagctttctcctgcaataataagtgcttatacaagaca 369

                                                                       
Query: 544 taaaagtttttaccttggcctcatggttcagacctaatctctgcacttgaacagtaattt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taaaagtttttaccttggcctcatggttcagacctaatctctgcacttgaacagtaattt 309

                                                          
Query: 604 ggatagaccaagaggatatttacagtgcttcatttaatggaaatttc 650
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggatagaccaagaggatatttacagtgcttcatttaatggaaatttc 262


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)