Query= MSMg01no510_c11.b1 MSMg01no510_c11.b1 CHROMAT_FILE:
MSMg01no510_c11.b1 PHD_FILE: MSMg01no510_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:40 2005
(660 letters)
>mm_chr13_73039092_73040151
Length = 1060
Score = 1149 bits (594), Expect = 0.0
Identities = 638/660 (96%), Gaps = 14/660 (2%)
Strand = Plus / Plus
Query: 1 gccttctgtagttttgctaatgttttgtcaaactcacaaggcttgtgttttgtgctggca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 gccttctgtagttttgctaatgttttgtcaaactcacaaggcttgtgttttgggctggca 260
Query: 61 gttaacacgaagggcactgcccagagacacctgagcattttaaggcattatttatgccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaacacgaagggcactgcccagagacacctgagcattttaaggcattatttatgccat 320
Query: 121 tctctctctaacagaactttgcaaatatttatgaagcgccgcatcagtgttacttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctctctaacagaactttgcaaatatttatgaagcgccgcatcagtgttacttctttt 380
Query: 181 tatctctctgctcacccagccctgttgcagcctaattgaaatacaataattataaatggg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctctctgctcacccagccctgttgcagcctaattgaaatacaataattataaatgga 440
Query: 241 cttagttcttcaatttaatttccttgcaagcagtgccatttatttttctttgcatttgtt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttagttcctcaatttaatttccttgcaagcagtgccatttatttttctttgcatttgtt 500
Query: 301 aacatgccttaattaaaagatttaacaaagccagtgaaacaaaatgccattgggggcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatgccttaattaaaagatttaacaaagccagtgaaacaaaatgccattgggggcatg 560
Query: 361 gcaccctggttacttgtggaaagtaacactgtgtaatggtgttcgagttcacctctggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaccctggttacttgtggaaagtaacactgtgtaatggtgttcgagttcacctctggaa 620
Query: 421 gagagagggagagagagagagagagagagagagagagagagagagagagagagagagaga 480
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagag--agagagagagagagagagagagagagagagagagagagagagagagagaga 678
Query: 481 gagagagagagagagagagagagagctactttttaggagcctcatgagtagccatagggc 540
||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 679 gagagagag-g-----------gcgctactttttaggagcctcatgagtagccatagggc 726
Query: 541 cactcatatacaagtcttggggttagtgttccaacatgtgcattcccagtcaaggctacc 600
|| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 727 cattcatatacaagtcttggtgttagtgttccaacatgtgcatccccagtcaaggctacc 786
Query: 601 cagcttctgtgtttgtgtagggcactaaatctgttttacgttcctttctttatgtcttaa 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 787 cagcttctgtgtttgtgtagggcactaaatctgttttacattcctttctttatgtcttaa 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 139
Number of extensions: 45
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_c11.g1 MSMg01no510_c11.g1 CHROMAT_FILE:
MSMg01no510_c11.g1 PHD_FILE: MSMg01no510_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:40 2005
(195 letters)
>mm_chr13_73170896_73171490
Length = 595
Score = 333 bits (172), Expect = 5e-96
Identities = 184/188 (97%)
Strand = Plus / Minus
Query: 1 gagtctcaggagacacaatgacacatatttgagtcaccctagtagagtcccaggcgcatt 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 388 gagtctcaggagacacaatgacatatatttgagtcaccctagtagagtcccaggtgcatt 329
Query: 61 tgtttctgggggctgctgactgataggggcaagtcagcaagggtgtccaaagcagaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgtttctgggggctgctgactgataggggcaagtcagcaagggtgtccaaagcagaccat 269
Query: 121 atcctgctgtgtgattcaggatggagtgaatgaggaaggtctggagcagaccaccttcct 180
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 268 atcctgctgtgtgattcaggatggagtgaatgaggaagatttggagcagaccaccttcct 209
Query: 181 ccacacct 188
||||||||
Sbjct: 208 ccacacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
