CAATAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGTCGCATACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
AGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGCCCCAACTGGTAAGGAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGA
AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTA
GGATACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGAA
GAATGAAGACTGAAGTGTGGACACTATGCCCCCTCTTAGATTTGGGGACA

AATGCTGTGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTATAGCTTTCCTTGGTAAACTTTGACTT
CGCAGTCACTTATTCAGAATTCCTGAAAAAGTAAAACTAATGTTATTGTT
TATACTGTACGTGAACAAAGGAGAAGATGATCCTGTGATGGGGGAAGGAT
GAAAGGGAGCAACAGGAGTAGGAAGATGACAAGGTGTAATAGGGGTGAAT
ATGACATGTATATGTATGTTTTGTGACATATATTTTTTTCAATATACTCT
GACCACACTCTCCCCCTTTCTTCACTCCTCCCAGCAGTTCCCAAAACCTT
CACTCTCCCCCATATCTACCCCTCCTCTGTTTCTCTTCAAAAAAAAATGA
AGGCTTCCCAATGATACCCATTAATCACAGCTTAAGAAGATACAATTGGA
CTAGGTACAAGCCCACATATTTAGGCTGAATGGGGCAACCCAGTAGGAGA
AAAAGGGTCCCATGAGAAGGCAGAAGAGTCAGAGACAGCCTGCGACTCCC
ACTGTTAGGGGGTCCCACAAAAATCTCAAGTTAAACAACCACAGCATGTG
TACAGAGGGCCTAGAACATACCCATGCAGGCTCTATGATTGCTGCTTCAC
TCTCTGTGAGCCCCAGTGAGCTCTGCTTAGTTGAAGCTATGAGCTGTGTT
TTCCTGGTGACTAAATTCTTCTGCCTCCTACCATATTGTTTCTCCCTCTC
TTCCAGGGG

Query= MSMg01no511_i17.g1 MSMg01no511_i17.g1 CHROMAT_FILE:
MSMg01no511_i17.g1 PHD_FILE: MSMg01no511_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:26 2005
         (520 letters)



>mm_chr13_109640248_109641167
          Length = 920

 Score =  946 bits (489), Expect = 0.0
 Identities = 514/523 (98%), Gaps = 3/523 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatagctttccttggtaaactttgacttcgcagtcacttattcagaattcctgaaaaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatagctttccttggtaaactttgacttcgcagtcacttattcagaattcctgaaaaagt 260

                                                                       
Query: 61  aaaactaatgttattgtttatactgtacgtgaacaaaggagaagatgatcctgtgatggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaactaatgttattgtttatactgtacgtgaacaaaggagaagatgatcctgtgatggg 320

                                                                       
Query: 121 ggaaggatgaaagggagcaacaggagtaggaagatgacaaggtgtaataggggtgaatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaggatgaaagggagcaacaggagtaggaagatgacaaggtgtaataggggtgaatat 380

                                                                       
Query: 181 gacatgtatatgtatgttttgtgacatatattttttt-caatatactctgaccacactct 239
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 381 gacatgtatatgtatgttttgtgacatatattttttttcaatatactctaaccacactct 440

                                                                       
Query: 240 ccccctttcttcactcctcccagcagttcccaaaaccttcactctcccccatatctaccc 299
           ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 441 ccccctttcttcactcctcccagcagtccccaaaaccttcactatcccccatatctaccc 500

                                                                       
Query: 300 ctcctctgtttctcttcaaaaaaaaa--tgaaggcttcccaatgatacccattaatcaca 357
           ||||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||
Sbjct: 501 ctcctctgtttctcttcaaaaaaaaaaatgaaggtttcccaatgacacccattaatcaca 560

                                                                       
Query: 358 gcttaagaagatacaattggactaggtacaagcccacatatttaggctgaatggggcaac 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttaagaagatacaattggactaggtacaagcccacatatttaggctgaatggggcaac 620

                                                                       
Query: 418 ccagtaggagaaaaagggtcccatgagaaggcagaagagtcagagacagcctgcgactcc 477
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 ccagtaggagaaaaagggtcccatgagcaggcagaagagtcagagacagcctgcgactcc 680

                                                      
Query: 478 cactgttagggggtcccacaaaaatctcaagttaaacaaccac 520
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cactgttagggggtcccacaaaaatctcaagttaaacaaccac 723


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)