XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATAAT
TTCCGAACTGATTCCACATATGAACCGAAGCCCACATGCCTCTCTCCCAT
AATAATAAATAAAAGTTGCTTTTTTGAAGGCACATGAACCACTGTACAAT
TAAGACAATTTGTTTTGTAAAGGAGAGAGGTAGGGAGGTCAGAGACATAA
TATCATGTGAGATGGAAACAAGCCATTTGATTCTTCTTTTGACATGCTGA
TAAGTGTTATACATTGACAAATCTTTATACTCCCTTTAAAAAGGTGTTTG
TATACATGGTTCAAGCCTGCTGCCATGAGTGAGCACTGTGTAGCAGAAGG
CCTGTGCTTTCAGGTTGCCTCTCACCAGGCCAGTCCCTAAATTCTGTCCA
AACTGGCTCCCCAGGTTAAAATTGGGGGTGACAAAACCACTCTGGTCATA
AAACTGCTGTGAAGACTGTTATACTGAGCCAGCCACACCCCATAAACCAG
GCGGCCATGTTTATGCTCACACAGTACTCATACACACAGCCCTGGATCTT
ACTGCACGAGCATACTCTAAAATAAAGGCTCTGACACAGGAGACAAAGAT
GAACAAGACAGAAAAAGATGAACACAAGCAACTTTAAAGTTATTGTTTAT
TTGACAATTCCCAAGTTGACTTAAAAAACTTATATGATATTTTCAGCAAA
CTGAATACTGGTGGCTTCTTTTTCCTTTCTGTAATGTNCAACATGCTCAA
TTTGTTGCTCAAGTGACAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXACATGCAACTTCCTACTGCTGCCCTTGCTTTGCAACA
TAATCCAGCTGAAACAATGGATAAGTCTGTGGGCTTTCCCTATATAAACA
CAGTGCTGAATGATAAACTTGAAGTCTTGACTTGGCTTCCTCCTTCTCTT
GCCCCCCCCCATCTCTTTTTCATTTCCAGTCCCCCTTTCAGGTAAACACA
GTTTGCCCATGGCCGCTGGATGGCTATAGGTGGCACCCAACATGGGGCCT
GAAAACAAGGCGAGGGTGGGGTGGGGAGGGGAGGGACCCACTGAGAAATG
CTGTCTTGGATGGAGCTCAACAGAAAACAGAAGAAAAGTAAAAATATCCT
GCTCAGTAAGCAACGAACAGCATTCACGCTAGTGCTAGTTATAAATTTTG
TTTTATTTTTTGGAGGCTGGTGTTGCAGGCGGTACATTTGAGGGGATACA
GGCTAGGCTGAGGAGGTGTTGACCCGATGCAGGCTTCACCTATGGGTGAC
AGTGCAATGGGACAAGGGAATTCTAAACAAGCATTTGTCCTCATCCTCAA
AGAGCTGCTTCAGGTGTGAGGAGTAGGGTTTAAAAAAAAAAAAAAAGATG
TTAGAAAAATTCCTAACTCAAGTAGATTTATGCTGTCCATGGTTCCCAGA
AGTAGGAATGGTAAATATACAAATGACTTGAGAAAGAGAGAGAGAGACCG
AGAGACAAN

Query= MSMg01no513_p15.b1 MSMg01no513_p15.b1 CHROMAT_FILE:
MSMg01no513_p15.b1 PHD_FILE: MSMg01no513_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:41 2005
         (677 letters)



>mm_chr13_94182616_94183692
          Length = 1077

 Score = 1294 bits (669), Expect = 0.0
 Identities = 675/677 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aactgattccacatatgaaccgaagcccacatgcctctctcccataataataaataaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aactgattccacatatgaaccgaagcccacatgcctctctcccataataataaataaaag 818

                                                                       
Query: 61  ttgcttttttgaaggcacatgaaccactgtacaattaagacaatttgttttgtaaaggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttgcttttttgaaggcacatgaaccactgtacaattaagacaatttgttttgtaaaggag 758

                                                                       
Query: 121 agaggtagggaggtcagagacataatatcatgtgagatggaaacaagccatttgattctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 agaggtagggaggtcagagacataatatcatgtgagatggaaacaagccatttgattctt 698

                                                                       
Query: 181 cttttgacatgctgataagtgttatacattgacaaatctttatactccctttaaaaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cttttgacatgctgataagtgttatacattgacaaatctttatactccctttaaaaaggt 638

                                                                       
Query: 241 gtttgtatacatggttcaagcctgctgccatgagtgagcactgtgtagcagaaggcctgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gtttgtatacatggttcaagcctgctgccatgagtgagcactgtgtagcagaaggcctgt 578

                                                                       
Query: 301 gctttcaggttgcctctcaccaggccagtccctaaattctgtccaaactggctccccagg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 577 gctttcaggttgcctctcaccaggccagtccctaaattctgtccaaactggctctccagg 518

                                                                       
Query: 361 ttaaaattgggggtgacaaaaccactctggtcataaaactgctgtgaagactgttatact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttaaaattgggggtgacaaaaccactctggtcataaaactgctgtgaagactgttatact 458

                                                                       
Query: 421 gagccagccacaccccataaaccaggcggccatgtttatgctcacacagtactcatacac 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 457 gagccagccacaccccataaaccaggcagccatgtttatgctcacacagtactcatacac 398

                                                                       
Query: 481 acagccctggatcttactgcacgagcatactctaaaataaaggctctgacacaggagaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acagccctggatcttactgcacgagcatactctaaaataaaggctctgacacaggagaca 338

                                                                       
Query: 541 aagatgaacaagacagaaaaagatgaacacaagcaactttaaagttattgtttatttgac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagatgaacaagacagaaaaagatgaacacaagcaactttaaagttattgtttatttgac 278

                                                                       
Query: 601 aattcccaagttgacttaaaaaacttatatgatattttcagcaaactgaatactggtggc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aattcccaagttgacttaaaaaacttatatgatattttcagcaaactgaatactggtggc 218

                            
Query: 661 ttctttttcctttctgt 677
           |||||||||||||||||
Sbjct: 217 ttctttttcctttctgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)