TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCGG
AATTCAGTAGAATCCCAGACTGATGTAAATCCAAGGATGGTAAGAGAATC
TGACTTGGGAGAGAGGACTGGGCTGGGTAAATTGTTAGCACATAGTCTCT
AAAGGTTGTGGTCATCCCCAGAGTGATATAGCCAGTGAAAACTTTGAAGG
GTAAGAAAAAGATGACTGTCACCTATGACTAAACCTTGGTCCTCAACAGG
ATCGACAAAGGCTCTAGCCACTGAGCCACTGATTTCAAAACCTGCTCACA
GATTTTAAAGGGATAGTCAGAAAGGCAAAGTATCCACGGAAGGAAGACGG
TCAGATGCAGGTGGTAAAACGGGAGGTGTTGGTATCATAGAAATTAGTGG
TAGCTTGTGGTTCTCTAAGAATGGAACAAGACAGCAAATGCTTCCAAGAG
GTCAGGCAAGATGAACACTGATCGTGTCCACAAAATCGTGTCTTATCGCC
TTAGGAAAGAGCAATTCTGATTCATCAGTGACAACAGGGTTAAGATAAAA
CAAAAAGATCCCTCAGGGTGAGCAAGATAATGAGTAGAGACTATGAGGGA
AGACAGCCAGAGGGACTTGACAGTCGTTGGAGGTGATACAGGATTAAAGG
GGGGTCGTTATTTTTAAATCCTTAGGCAAGCTACGCCACACTCCATAATG
AAGCATTCATAAGGGAAGTGGTGCTAC

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTAATGACAGATCCAGGGGGGAAAACAAT
CCTTAAATTTATATTGAAATACAAAAGGCCCAAATGACCAAAACAGTTGA
AAGTAGAAAGGACCATGTTGGAGAGTCCACATGTGACCTCAAGTTAGACC
ACAGAACCATGGTGACAAAGCCAGAAGGCACTGCCACAAAAACAGGTATG
TAGACCAGTTGAATAGAGTATAGATCTCAGAAAGAAGCTCACATAACTAC
AGCCACCTCGTTTTTGATAAAGTTGTCTAAATATACATTGGGAAAAAAGA
CAGCACATTCAACAAATTGTGTTGGGAAAACTGGGTATTCATATACAGAA
AATGAAAATAGTTACATACCTCTTAGTCTGAACACAAATCAATGAAAACA
TTTCAAAGATCTTAATATAAGACTTGAGATACTGGAATTGGTAGGGGGAA
ACACTTCATGATATGGATATAGGTACAAACTTTCTGGAAAAGACTCTAAT
ACCTCAGGAAATAATCAAAAGAATTGACAAATGGTATTCCATGAAACTAG
AAGGTTTCTGCACAGAGTGAAGAAGCAGCCTACAGAATGGGTGAGAAAAA
AAATCAGAAATGCAGTTACTATCTAGCACATATAAAAGCTGCAAAAATCA
AATACCAAAAGTATAAATTTCCAATCAACTAACTN

Query= MSMg01no514_g03.b1 MSMg01no514_g03.b1 CHROMAT_FILE:
MSMg01no514_g03.b1 PHD_FILE: MSMg01no514_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:15 2005
         (616 letters)



>mm_chr13_45329363_45330381
          Length = 1019

 Score = 1131 bits (585), Expect = 0.0
 Identities = 610/619 (98%), Gaps = 3/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgatgtaaatccaaggatggtaagagaatctgacttgggagagaggactgggctgggta 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatgtaaatccaaggatggtaagaggatctgacttgggagagaggactgggctgggta 260

                                                                       
Query: 61  aattgttagcacatagtctctaaaggttgtggtcatccccagagtgatatagccagtgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgttagcacatagtctctaaaggttgtggtcatccccagagtgatatagccagtgaa 320

                                                                       
Query: 121 aactttgaagggtaagaaaaagatgactgtcacctatgactaaaccttggtcctcaacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactttgaagggtaagaaaaagatgactgtcacctatgactaaaccttggtcctcaacag 380

                                                                       
Query: 181 gatcgacaaaggctctagccactgagccactgatttcaaaacctgctcacagattttaaa 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatcgacaaaggctctagtcactgagccactgatttcaaaacctgctcacagattttaaa 440

                                                                       
Query: 241 gggatagtcagaaaggcaaagtatccacggaaggaagacggtcagatgcaggtggtaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggatagtcagaaaggcaaagtatccacggaaggaagacggtcagatgcaggtggtaaaa 500

                                                                       
Query: 301 cgggaggtgttggtatcatagaaattagtggtagcttgtggttctctaagaatggaacaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgggaggtgttggtatcatagaaattagtggtagcttgtggttctctaagaatggaacaa 560

                                                                       
Query: 361 gacagcaaatgcttccaagaggtcaggcaagatgaacactgatcgtgtccacaaaatcgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacagcaaatgcttccaagaggtcaggcaagatgaacactgatcgtgtccacaaaatcgt 620

                                                                       
Query: 421 gtcttatcgccttaggaaagagcaattctgattcatcagtgacaacagggttaagataaa 480
           | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccttatcgccctaggaaagagcaattctgattcatcagtgacaacagggttaagataaa 680

                                                                       
Query: 481 acaaaaagatccctcagggtgagcaagataatgagtagagactatgagggaagacagcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaaaagatccctcagggtgagcaagataatgagtagagactatgagggaagacagcca 740

                                                                       
Query: 541 gagggacttgacagtcgttggaggtgatacaggattaaagggggg-tcgtt--attttta 597
           ||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||
Sbjct: 741 gagggacttgacagttgttggaggtgatacaggattaaagggggggtcgttttattttta 800

                              
Query: 598 aatccttaggcaagctacg 616
           || ||||||||||||||||
Sbjct: 801 aacccttaggcaagctacg 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1019
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1009
Effective search space:   611454
Effective search space used:   611454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)