TTTATCACACCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCTGTTTACCTCTCTTCCTATTTTTGATAGTGTTATT
TGGTTCTCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGATATTA
TCCCCTATCAGATGTAGGATTGGTAAAGATCTTATCCAATCTGTTAGTCT
ACATTTTTTATTAGGGTATTAGTCCATTGATGCTAAGAAATATTAAGGAA
TAGTGATTGCTGCTTCCTGTTATTTTTGTTGTTAGAGGTGGAATTATGTT
TGTGTTGCTATCTTCTTTTGGTTTTGCTGAAATAAGATTACTTTCTTGCT
TTTTGTAGGGTGTAGTTTTCCTCCTTGGGTTGGTGTTTTCCATCTATTAT
CCTTTGTAGGACTGCATTTGTGGTGAAATTTGGGTTCTGATGATGCCAAG
TAACCTTGGTTTCTGTTGCTTATGTTCTTACACTTGCCTCCTGCCATCTG
GTTATCTCTAGTGCTACCTGCCCTGGCTATATCTGACTGGAGCTTGTCCT
TCCTGTAATCCTGGTTGTTTCAGAACTTCTCAGAGTCCGGCTATCTCTGT
GATCCTGTGATTCTGGGATCCTGTGATCCTGAGATCCTGGGTGTGTTAGA
GCTCCTCGGAGTCAAGCTGCCCCTGGGACCCTGGGATCCTGGACGTGTTA
GAGCACCTAGGAGTGGAGCTTCCTCTGGCTGTTGTGGAACTGGCTGTGG

TTTTTTTTTCTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCCGCTTCTTCCCA
GTCCCTATCACCTAAGCTGTCTGCAGAACTTGGTTACTTTTTGTAGACTG
TAGCTGGGAAGAGGCAGATGCCCCACTGTGTTGGGCACTGAGGAAATAAA
GGCTGGGCACATCTGCAGTAGACTTCCAGGGATGCTGATGTTGCACCCTC
TGCAGTAGACTTTCAGGGAGGCTGATGTTGCACCCTCTGCAGTAGACTTC
CAGGGATGCTGATGTTGCACCCTCTGCAGTAGACTTTCAGGGAGGCTGAT
GTTTAGCAGAGGTAGTCTAGCACAGCCATAGCACTGAAGTTCTGGCCCTA
AGTCCAGGGTACCAGGAAGGGGTCAGAGCAAGCAAGCTTCTGTGAGTGTG
CTGCGAACGTTTCAGAGGTAGGTTTGTTCAGGCAAGGGCTTCGCAACTCC
ATGTGCACATTGAAGCTTCCTAGCGCTTTAAAAGCAAAAATATAGCAAAG
TCCAAAGTCTGTCCCAACAGTAATACCAGAGTTGTTGGTGGCAGAGAGGC
ATGGGTGGTGGCAGTATTTTCTTAAGGCTCCTGCAGGTGTTTTAAAGTAT
TCCAGACTTTAGAACCAGTCTTCGAAGCAGAGACTAATGAGTTTTGAAAA
GCTAATAAGGGCTCTGAGTTTTGTATGTCTTTCTTTTAAAAAAAAAGTAC
TT

Query= MSMg01no515_d20.g1 MSMg01no515_d20.g1 CHROMAT_FILE:
MSMg01no515_d20.g1 PHD_FILE: MSMg01no515_d20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:28 2005
         (591 letters)



>mm_chr13_93869976_93870966
          Length = 991

 Score =  922 bits (477), Expect = 0.0
 Identities = 545/591 (92%), Gaps = 37/591 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccccgcttcttcccagtccctatcacctaagctgtctgcagaacttggttactttttgt 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 918 tccccgcttcttcccagtccctttcacctaagctgtctgcagaacttggttacttttcgt 859

                                                                       
Query: 61  agactgtagctgggaagaggcagatgccccactgtgttgggcactgaggaaataaaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 agactgtagctgggaagaggcagatgccccactgtgttgggcactgaggaaataaaggct 799

                                                                       
Query: 121 gggcacatctgcagtagacttccagggatgctgatgttgcaccctctgcagtagactttc 180
           |||||||||||||||||||||||||||                       ||        
Sbjct: 798 gggcacatctgcagtagacttccaggg-----------------------gt-------- 770

                                                                       
Query: 181 agggaggctgatgttgcaccctctgcagtagacttccagggatgctgatgttgcaccctc 240
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ------gctgatgttgcaccctctgcagtagacttccagggatgctgatgttgcaccctc 716

                                                                       
Query: 241 tgcagtagactttcagggaggctgatgtttagcagaggtagtctagcacagccatagcac 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tgcagtagacttccagggaggctgatgtttagcagaggtagtctagcacagccatagcac 656

                                                                       
Query: 301 tgaagttctggccctaagtccagggtaccaggaaggggtcagagcaagcaagcttctgtg 360
           | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 taaagttctcgccctaagtccagggtaccaggaaggggtcagagcaagcaagcttctgtg 596

                                                                       
Query: 361 agtgtgctgcgaacgtttcagaggtaggtttgttcaggcaagggcttcgcaactccatgt 420
           |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 595 agtgtgctgcaaacgtttcagaggtaggtttgttcaggcaagggcttctcaactccgtgt 536

                                                                       
Query: 421 gcacattgaagcttcctagcgctttaaaagcaaaaatatagcaaagtccaaagtctgtcc 480
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gcacattgaagctccctagcgctttaaaagcaaaaatatagcaaagtccaaagtctgtcc 476

                                                                       
Query: 481 caacagtaataccagagttgttggtggcagagaggcatgggtggtggcagtattttctta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caacagtaataccagagttgttggtggcagagaggcatgggtggtggcagtattttctta 416

                                                              
Query: 541 aggctcctgcaggtgttttaaagtattccagactttagaaccagtcttcga 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aggctcctgcaggtgttttaaagtattccagactttagaaccagtcttcga 365


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)